RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 COMMD7Q86VX2 200 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 OR1L8Q8NGR8 309 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 TMEM147Q9BVK8 224 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 PLEKHA3Q9HB20 300 aa10.07□□□□□ -0.8
SHMT2-233ENST00000557529 TBL2Q9Y4P3 447 aaKnown RBP10.07□□□□□ -0.8
SHMT2-233ENST00000557529 IGHV3-72A0A0B4J1Y9 119 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 TEX50A0A1B0GTY4 177 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 C15orf62A8K5M9 175 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 PMS2P5A8MQ11 134 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 ZNF705EA8MWA4 302 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-233ENST00000557529 OR8U8P0C7N1 319 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 ATP6V0CP27449 155 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 UBE2E1P51965 193 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 RAB11AP62491 216 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 HABP2Q14520 560 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-233ENST00000557529 NRGNQ92686 78 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 CXorf58Q96LI9 332 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 TBX15Q96SF7 602 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 HINT2Q9BX68 163 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 LPAR2Q9HBW0 351 aa10.06□□□□□ -0.8
SHMT2-233ENST00000557529 BEX4Q9NWD9 120 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-233ENST00000557529 A0A1W2PN81 502 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 UMAD1C9J7I0 102 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 TRIM77I1YAP6 450 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 TIMM23O14925 209 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 SLC25A17O43808 307 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 MAS1LP35410 378 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 CHRNA7P36544 502 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 F2RL1P55085 397 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 PAX8Q06710 450 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 PSG5Q15238 335 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 CLEC12BQ2HXU8 276 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 LRRC75BQ2VPJ9 315 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 LDLRAD2Q5SZI1 272 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 MMD2Q8IY49 270 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 SLC24A4Q8NFF2 622 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 OR2G3Q8NGZ4 309 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 CITED4Q96RK1 184 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 GGACTQ9BVM4 153 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 UQCC1Q9NVA1 299 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 HILPDAQ9Y5L2 63 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 DCHS2Q6V1P9 2916 aa10.05□□□□□ -0.8
SHMT2-233ENST00000557529 NUDT19A8MXV4 375 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 VENTXO95231 258 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 CRYGBP07316 175 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 NPY1RP25929 384 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 COL8A1P27658 744 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 VWC2Q2TAL6 325 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 ETV3LQ6ZN32 361 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 LHFPL4Q7Z7J7 247 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 THNSL2Q86YJ6 484 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 MRPL41Q8IXM3 137 aaKnown RBP10.04□□□□□ -0.8
SHMT2-233ENST00000557529 CFHR4Q92496 578 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 RBMXL1Q96E39 390 aaKnown RBP10.04□□□□□ -0.8
SHMT2-233ENST00000557529 RITA1Q96K30 269 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 PSMG3Q9BT73 122 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-233ENST00000557529 SH3BGRL3Q9H299 93 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 ZNF430Q9H8G1 570 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-233ENST00000557529 NDUFA4L2Q9NRX3 87 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 CHD6Q8TD26 2715 aa10.04□□□□□ -0.8
SHMT2-233ENST00000557529 COL12A1Q99715 3063 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 ARHGAP32A7KAX9 2087 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 A0A1W2PRD5 423 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 A0A1W2PRF3 423 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 A0A1W2PRM7 423 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 MOSP00540 346 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 PRH1P02810 166 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 IFNA4P05014 189 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 MYOD1P15172 320 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 DLK1P80370 383 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 ERHP84090 104 aaKnown RBP10.03□□□□□ -0.8
SHMT2-233ENST00000557529 PRSS8Q16651 343 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 HSD17B13Q7Z5P4 300 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-233ENST00000557529 LRRC75A-AS1Q8N1F1 130 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 MALSU1Q96EH3 234 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 WDR61Q9GZS3 305 aaKnown RBP10.03□□□□□ -0.8
SHMT2-233ENST00000557529 PARP11Q9NR21 331 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 PLA2G2EQ9NZK7 142 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 SIGLEC9Q9Y336 463 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 TIMM9Q9Y5J7 89 aa10.03□□□□□ -0.8
SHMT2-233ENST00000557529 UBE2L5PA0A1B0GUS4 154 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 MFSD2BA6NFX1 497 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 RRHO14718 337 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 ACTL6BO94805 426 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 OPN1MWP04001 364 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 MSMBP08118 114 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 OPN1MW2P0DN77 364 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 OPN1MW3P0DN78 364 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 SNCAP37840 140 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 CAMLGP49069 296 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 SSX2Q16385 188 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 AKR1C8PQ5T2L2 129 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 PXDC1Q5TGL8 231 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 DPPA3Q6W0C5 159 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 TMEM182Q6ZP80 229 aaPredicted RBP10.02□□□□□ -0.8
SHMT2-233ENST00000557529 Q6ZRG5 221 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 EIF4E3Q8N5X7 224 aaKnown RBP10.02□□□□□ -0.8
SHMT2-233ENST00000557529 OR2T10Q8NGZ9 312 aa10.02□□□□□ -0.8
SHMT2-233ENST00000557529 TAF15Q92804 592 aaKnown RBP eCLIP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms