RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 TRAV3A0A0B4J244 114 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 GPR31O00270 319 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 UPK2O00526 184 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 PGLYRP1O75594 196 aaPredicted RBP14.05□□□□□ -0.16
NEDD1-208ENST00000555806 REG1AP05451 166 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 DEFA4P12838 97 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 RCVRNP35243 200 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 CTF1Q16619 201 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 POU2AF1Q16633 256 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 RNASE12Q5GAN4 147 aaKnown RBP14.05□□□□□ -0.16
NEDD1-208ENST00000555806 LYSMD2Q8IV50 215 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 MRPS26Q9BYN8 205 aaKnown RBP14.05□□□□□ -0.16
NEDD1-208ENST00000555806 COMMD5Q9GZQ3 224 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 PEMTQ9UBM1 199 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 U3KQK5 164 aa14.05□□□□□ -0.16
NEDD1-208ENST00000555806 CRYGCP07315 174 aa14.04□□□□□ -0.16
NEDD1-208ENST00000555806 F2RP25116 425 aa14.04□□□□□ -0.16
NEDD1-208ENST00000555806 OR2B8PP59922 312 aa14.04□□□□□ -0.16
NEDD1-208ENST00000555806 FAM209BQ5JX69 171 aa14.04□□□□□ -0.16
NEDD1-208ENST00000555806 IL34Q6ZMJ4 242 aa14.04□□□□□ -0.16
NEDD1-208ENST00000555806 WWC2-AS2Q96NR7 200 aa14.04□□□□□ -0.16
NEDD1-208ENST00000555806 PPP5D1E7EU14 171 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 H0Y980 276 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 NDUFB8O95169 186 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 IGHV3-23P01764 117 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 CSN3P07498 182 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 HIST1H1BP16401 226 aaKnown RBP14.03□□□□□ -0.16
NEDD1-208ENST00000555806 ZNF182P17025 639 aaPredicted RBP14.03□□□□□ -0.16
NEDD1-208ENST00000555806 CTRB1P17538 263 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 S100GP29377 79 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 LPAR6P43657 344 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 PHLDA2Q53GA4 152 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 CTRB2Q6GPI1 263 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 GPR141Q7Z602 305 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 DGCR14Q96DF8 476 aaKnown RBP14.03□□□□□ -0.16
NEDD1-208ENST00000555806 FANCD2OSQ96PS1 177 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 S4R3C0 116 aa14.03□□□□□ -0.16
NEDD1-208ENST00000555806 CGB1A6NKQ9 187 aa14.02□□□□□ -0.17
NEDD1-208ENST00000555806 MARCH11A6NNE9 402 aa14.02□□□□□ -0.17
NEDD1-208ENST00000555806 FRMD6-AS1P0C7T7 363 aa14.02□□□□□ -0.17
NEDD1-208ENST00000555806 LPCAT3Q6P1A2 487 aa14.02□□□□□ -0.17
NEDD1-208ENST00000555806 FCAMRQ8WWV6 532 aa14.02□□□□□ -0.17
NEDD1-208ENST00000555806 EEF1AKMT3Q96AZ1 226 aa14.02□□□□□ -0.17
NEDD1-208ENST00000555806 QTRT1Q9BXR0 403 aaKnown RBP14.02□□□□□ -0.17
NEDD1-208ENST00000555806 EXTL2Q9UBQ6 330 aa14.02□□□□□ -0.17
NEDD1-208ENST00000555806 GGCTO75223 188 aaKnown RBP14.01□□□□□ -0.17
NEDD1-208ENST00000555806 KRASP01116 189 aa14.01□□□□□ -0.17
NEDD1-208ENST00000555806 HLA-AP01891 365 aaKnown RBP14.01□□□□□ -0.17
NEDD1-208ENST00000555806 LCN12Q6JVE5 192 aa14.01□□□□□ -0.17
NEDD1-208ENST00000555806 CLEC19AQ6UXS0 136 aa14.01□□□□□ -0.17
NEDD1-208ENST00000555806 SBSPONQ8IVN8 264 aa14.01□□□□□ -0.17
NEDD1-208ENST00000555806 SGPP2Q8IWX5 399 aa14.01□□□□□ -0.17
NEDD1-208ENST00000555806 SIGLEC8Q9NYZ4 499 aa14.01□□□□□ -0.17
NEDD1-208ENST00000555806 IGLV11-55A0A075B6I3 123 aa14□□□□□ -0.17
NEDD1-208ENST00000555806 IGLC7A0M8Q6 106 aa14□□□□□ -0.17
NEDD1-208ENST00000555806 M0QYG6 137 aa14□□□□□ -0.17
NEDD1-208ENST00000555806 OR2C1O95371 312 aa14□□□□□ -0.17
NEDD1-208ENST00000555806 G6PCP35575 357 aa14□□□□□ -0.17
NEDD1-208ENST00000555806 ARL3P36405 182 aa14□□□□□ -0.17
NEDD1-208ENST00000555806 THOC7Q6I9Y2 204 aaKnown RBP14□□□□□ -0.17
NEDD1-208ENST00000555806 Q8N402 240 aa14□□□□□ -0.17
NEDD1-208ENST00000555806 DYNLRB2Q8TF09 96 aa14□□□□□ -0.17
NEDD1-208ENST00000555806 CCDC140Q96MF4 163 aa14□□□□□ -0.17
NEDD1-208ENST00000555806 SRSF8Q9BRL6 282 aaKnown RBP14□□□□□ -0.17
NEDD1-208ENST00000555806 HINT2Q9BX68 163 aa14□□□□□ -0.17
NEDD1-208ENST00000555806 MFSD2BA6NFX1 497 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 SNAPC5O75971 98 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 IFNA6P05013 189 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 FGF2P09038 288 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 TRAPPC2P0DI81 140 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 TRAPPC2BP0DI82 140 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 ALDH3B2P48448 385 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 ZNF585BQ52M93 769 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 TBC1D26Q86UD7 250 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 SLC38A6Q8IZM9 456 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 Q8N1Y9 231 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 OR10W1Q8NGF6 305 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 OR1L8Q8NGR8 309 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 OR52I2Q8NH67 350 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 NSG2Q9Y328 171 aa13.99□□□□□ -0.17
NEDD1-208ENST00000555806 TEX50A0A1B0GTY4 177 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 CYB5BO43169 146 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 IGHV4-30-4P0DP06 118 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 KLK9Q2XQG4 91 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 RNASE10Q5GAN6 216 aaKnown RBP13.98□□□□□ -0.17
NEDD1-208ENST00000555806 GTSCR1Q86UQ5 136 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 CXorf58Q96LI9 332 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 THYN1Q9P016 225 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 KLK11Q9UBX7 282 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 KLK9Q9UKQ9 250 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 OR51B2Q9Y5P1 312 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 DMRT1Q9Y5R6 373 aa13.98□□□□□ -0.17
NEDD1-208ENST00000555806 TRBV7-1A0A0A6YYK4 115 aa13.97□□□□□ -0.17
NEDD1-208ENST00000555806 IZUMO1RA6ND01 250 aa13.97□□□□□ -0.17
NEDD1-208ENST00000555806 RGS5O15539 181 aa13.97□□□□□ -0.17
NEDD1-208ENST00000555806 OR13C7P0DN81 318 aa13.97□□□□□ -0.17
NEDD1-208ENST00000555806 PGAM2P15259 253 aa13.97□□□□□ -0.17
NEDD1-208ENST00000555806 UCP3P55916 312 aa13.97□□□□□ -0.17
NEDD1-208ENST00000555806 HSD17B13Q7Z5P4 300 aaPredicted RBP13.97□□□□□ -0.17
NEDD1-208ENST00000555806 CLVS1Q8IUQ0 354 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms