RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 OR1L8Q8NGR8 309 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 THAP6Q8TBB0 222 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 ARPC1AQ92747 370 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 GPR146Q96CH1 333 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 HINT2Q9BX68 163 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 QTRT1Q9BXR0 403 aaKnown RBP8.95□□□□□ -0.98
SHMT2-220ENST00000555634 HIPK2Q9H2X6 1198 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 PRDM13Q9H4Q3 707 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 ZNF430Q9H8G1 570 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-220ENST00000555634 TMEM14BQ9NUH8 114 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 VPS13CQ709C8 3753 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 DNHD1Q96M86 4753 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 SETD2Q9BYW2 2564 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-220ENST00000555634 TET2Q6N021 2002 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-220ENST00000555634 TRIM77I1YAP6 450 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 TCF21O43680 179 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 GPR137BO60478 399 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 CRLF1O75462 422 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 TSPAN9O75954 239 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 CA2P00918 260 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 IGLV2-23P01705 113 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 OR9G9P0C7N8 305 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 CNTFRP26992 372 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 COMPP49747 757 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-220ENST00000555634 SPCS3P61009 180 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 TNFRSF9Q07011 255 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 LRRC37A5PQ49AS3 106 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 C9orf152Q5JTZ5 239 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 NOXA1Q86UR1 476 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 FAM71E2Q8N5Q1 922 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 C5orf56Q8N8D9 126 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 OR52E5Q8NH55 327 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 FYTTD1Q96QD9 318 aaKnown RBP8.94□□□□□ -0.98
SHMT2-220ENST00000555634 GON7Q9BXV9 100 aa8.94□□□□□ -0.98
SHMT2-220ENST00000555634 GSX1Q9H4S2 264 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-220ENST00000555634 LSM5Q9Y4Y9 91 aaKnown RBP8.94□□□□□ -0.98
SHMT2-220ENST00000555634 CLDN34H7C241 214 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 SSSCA1O60232 199 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 NXPH3O95157 252 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 SIX6O95475 246 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 P0C879 139 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 CXCL3P19876 107 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 SUB1P53999 127 aaKnown RBP eCLIP8.93□□□□□ -0.98
SHMT2-220ENST00000555634 H2BFSP57053 126 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 RPL23AP62750 156 aaKnown RBP8.93□□□□□ -0.98
SHMT2-220ENST00000555634 PRCDQ00LT1 54 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 RELBQ01201 579 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 TMEM267Q0VDI3 215 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-220ENST00000555634 Q8N9W7 124 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 OR2T35Q8NGX2 323 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 GRPEL2Q8TAA5 225 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 DTD1Q8TEA8 209 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 CHAC2Q8WUX2 184 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 OR10C1Q96KK4 312 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 ZNF48Q96MX3 618 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-220ENST00000555634 RAB40CQ96S21 281 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 SRSF8Q9BRL6 282 aaKnown RBP8.93□□□□□ -0.98
SHMT2-220ENST00000555634 PRSS22Q9GZN4 317 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 HEYLQ9NQ87 328 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-220ENST00000555634 ZC4H2Q9NQZ6 224 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 PARP11Q9NR21 331 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 HSPB7Q9UBY9 170 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 NSG2Q9Y328 171 aa8.93□□□□□ -0.98
SHMT2-220ENST00000555634 NSD1Q96L73 2696 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-220ENST00000555634 SONP18583 2426 aaKnown RBP8.92□□□□□ -0.98
SHMT2-220ENST00000555634 F8P00451 2351 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 A0A0G2JRQ6 117 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 A0A1B0GVG6 124 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 SRRM4A7MD48 611 aaKnown RBP8.92□□□□□ -0.98
SHMT2-220ENST00000555634 SYNGR2O43760 224 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 PSMB6P28072 239 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 SNCAP37840 140 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 HILS1P60008 231 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 HSPE1P61604 102 aaKnown RBP8.92□□□□□ -0.98
SHMT2-220ENST00000555634 ERHP84090 104 aaKnown RBP8.92□□□□□ -0.98
SHMT2-220ENST00000555634 FXYD3Q14802 87 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 ZNF562Q6V9R5 426 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 SLC35E3Q7Z769 313 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 STX12Q86Y82 276 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 OR4D5Q8NGN0 318 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 PPP1R1CQ8WVI7 109 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 SRSF12Q8WXF0 261 aaKnown RBP8.92□□□□□ -0.98
SHMT2-220ENST00000555634 TPSG1Q9NRR2 321 aa8.92□□□□□ -0.98
SHMT2-220ENST00000555634 SOX21Q9Y651 276 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-220ENST00000555634 HIVEP1P15822 2718 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 MPTX1A8MV57 137 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 E5RGE8 158 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 AP4M1O00189 453 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 CRYGBP07316 175 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 RNASE1P07998 156 aaKnown RBP8.91□□□□□ -0.98
SHMT2-220ENST00000555634 SRSF4Q08170 494 aaKnown RBP8.91□□□□□ -0.98
SHMT2-220ENST00000555634 IZUMO4Q1ZYL8 232 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 ZFP69Q49AA0 526 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 AARDQ4LEZ3 155 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 TCTE3Q8IZS6 198 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 INO80EQ8NBZ0 244 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-220ENST00000555634 OR1L6Q8NGR2 347 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 OR2T6Q8NHC8 308 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 PIFOQ8TCI5 191 aa8.91□□□□□ -0.98
SHMT2-220ENST00000555634 DCUN1D4Q92564 292 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms