RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 TSHBP01222 138 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 CTSDP07339 412 aaPredicted RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 GSTT2P0CG29 244 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 GSTT2BP0CG30 244 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 IGHV3-43DP0DP04 118 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 CALCBP10092 127 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 HIST1H1BP16401 226 aaKnown RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 PTBP1P26599 531 aaKnown RBP eCLIP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 PPP1CCP36873 323 aaKnown RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 SNU13P55769 128 aaKnown RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 UBE2KP61086 200 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 LIPEQ05469 1076 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 GNMTQ14749 295 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 KISS1Q15726 138 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 TMEM69Q5SWH9 247 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 C6orf141Q5SZD1 244 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF322Q6U7Q0 402 aaPredicted RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 HACD2Q6Y1H2 254 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 Q6ZRU5 148 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 SSX7Q7RTT5 188 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 ARPINQ7Z6K5 226 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 SLC25A42Q86VD7 318 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 IFT20Q8IY31 132 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 ARHGAP24Q8N264 748 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 PRSS35Q8N3Z0 413 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF383Q8NA42 475 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 OR52I2Q8NH67 350 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF502Q8TBZ5 544 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 GNPDA2Q8TDQ7 276 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 SRSF12Q8WXF0 261 aaKnown RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 DGCR14Q96DF8 476 aaKnown RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 CPNE2Q96FN4 548 aaPredicted RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 CXorf58Q96LI9 332 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 EBF4Q9BQW3 602 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 SRSF8Q9BRL6 282 aaKnown RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 TSSK6Q9BXA6 273 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 MED20Q9H944 212 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 TAF9BQ9HBM6 251 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 SPACA1Q9HBV2 294 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 NEK6Q9HC98 313 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 OR2S2Q9NQN1 319 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 PRR34Q9NV39 138 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 MRGBPQ9NV56 204 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 CLEC5AQ9NY25 188 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF581Q9P0T4 197 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 CACNG5Q9UF02 275 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 SMPXQ9UHP9 88 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 TP53TG3Q9ULZ0 132 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 MRPS16Q9Y3D3 137 aaKnown RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 PYGO1Q9Y3Y4 419 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 FAM32AQ9Y421 112 aaKnown RBP1.51□□□□□ -2.17
PTCH1-223ENST00000551623 LRRC42Q9Y546 428 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 IGHV7-4-1A0A0J9YVY3 117 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 LRCOL1A6NCL2 159 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 CCDC182A6NF36 153 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 MFSD2BA6NFX1 497 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 SRRM4A7MD48 611 aaKnown RBP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 LYRM9A8MSI8 78 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 H7C2Y5 167 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 GABRPO00591 440 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 CHEK1O14757 476 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 CREBL2O60519 120 aaPredicted RBP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 CIDEAO60543 219 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 SULT1C4O75897 302 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 IGLV2-8P01709 118 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 PRH1P02810 166 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 RPSAP08865 295 aaKnown RBP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF735P0CB33 412 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 RCC1P18754 421 aaPredicted RBP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 BDKRB2P30411 391 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 TSPOP30536 169 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 FUSP35637 526 aaKnown RBP eCLIP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 MAGEA2P43356 314 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 CCR9P51686 369 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 HNRNPA3P51991 378 aaKnown RBP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 ACTR3P61158 418 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 HAMPP81172 84 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 EFNB1P98172 346 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 SCN1BQ07699 218 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 ASAH1Q13510 395 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 RIPK1Q13546 671 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 HMGN3Q15651 99 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 SSX1Q16384 188 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 PIGYQ3MUY2 71 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 RPL39P5Q59GN2 51 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 SYT6Q5T7P8 510 aaPredicted RBP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 OGFRL1Q5TC84 451 aaPredicted RBP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 FAM222AQ5U5X8 452 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 CLEC19AQ6UXS0 136 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 CEACAM19Q7Z692 300 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 STPG4Q8N801 248 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 OR52N1Q8NH53 320 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 VN1R17PQ8TDU5 208 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 UBLCP1Q8WVY7 318 aaPredicted RBP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 EEF1AKMT3Q96AZ1 226 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 GALMQ96C23 342 aa1.5□□□□□ -2.17
PTCH1-223ENST00000551623 MRPS24Q96EL2 167 aaKnown RBP1.5□□□□□ -2.17
PTCH1-223ENST00000551623 BSCL2Q96G97 398 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms