RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 DHFR2Q86XF0 187 aa9.27□□□□□ -0.93
SNRPF-203ENST00000551316 CANT1Q8WVQ1 401 aa9.27□□□□□ -0.93
SNRPF-203ENST00000551316 BSCL2Q96G97 398 aaPredicted RBP9.27□□□□□ -0.93
SNRPF-203ENST00000551316 UHRF2Q96PU4 802 aa9.27□□□□□ -0.93
SNRPF-203ENST00000551316 AK3Q9UIJ7 227 aa9.27□□□□□ -0.93
SNRPF-203ENST00000551316 TNFRSF18Q9Y5U5 241 aa9.27□□□□□ -0.93
SNRPF-203ENST00000551316 HTR2CP28335 458 aa9.26□□□□□ -0.93
SNRPF-203ENST00000551316 OXA1LQ15070 435 aa9.26□□□□□ -0.93
SNRPF-203ENST00000551316 TMEM69Q5SWH9 247 aa9.26□□□□□ -0.93
SNRPF-203ENST00000551316 PUSL1Q8N0Z8 303 aaKnown RBP9.26□□□□□ -0.93
SNRPF-203ENST00000551316 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
SNRPF-203ENST00000551316 TMEM167AQ8TBQ9 72 aa9.26□□□□□ -0.93
SNRPF-203ENST00000551316 OR10C1Q96KK4 312 aa9.26□□□□□ -0.93
SNRPF-203ENST00000551316 OR51E2Q9H255 320 aa9.26□□□□□ -0.93
SNRPF-203ENST00000551316 SMPD3Q9NY59 655 aaPredicted RBP9.26□□□□□ -0.93
SNRPF-203ENST00000551316 RABAC1Q9UI14 185 aa9.26□□□□□ -0.93
SNRPF-203ENST00000551316 IGHV3OR16-12A0A075B7B8 117 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 TRBV6-6A0A0A6YYG2 114 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 A0A1W2PPQ1 181 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 K7EQG2 157 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 CREBL2O60519 120 aaPredicted RBP9.25□□□□□ -0.93
SNRPF-203ENST00000551316 FCGR3BO75015 233 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 DHFRP00374 187 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 OXTP01178 125 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 IFNA5P01569 189 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 P0C879 139 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 RRASP10301 218 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 GCSHP23434 173 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 OR2B8PP59922 312 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 RPL30P62888 115 aaKnown RBP9.25□□□□□ -0.93
SNRPF-203ENST00000551316 TTC32Q5I0X7 151 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 UBAC2Q8NBM4 344 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 GPR148Q8TDV2 347 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 RNF141Q8WVD5 230 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 NEU1Q99519 415 aa9.25□□□□□ -0.93
SNRPF-203ENST00000551316 YTHDF2Q9Y5A9 579 aaKnown RBP9.25□□□□□ -0.93
SNRPF-203ENST00000551316 DNASE2O00115 360 aaPredicted RBP9.24□□□□□ -0.93
SNRPF-203ENST00000551316 CD2P06729 351 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 CTSGP08311 255 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 CCL18P55774 89 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 USF2Q15853 346 aaPredicted RBP9.24□□□□□ -0.93
SNRPF-203ENST00000551316 IGSF11Q5DX21 431 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 CBR4Q8N4T8 237 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 ACBD7Q8N6N7 88 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 OR10W1Q8NGF6 305 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 VN1R17PQ8TDU5 208 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 DNAJC9Q8WXX5 260 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 LGALS12Q96DT0 336 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 CMTM3Q96MX0 182 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 VSIRQ9H7M9 311 aa9.24□□□□□ -0.93
SNRPF-203ENST00000551316 LPAP08519 4548 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 A0A087WTM6 91 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 ST8SIA3O43173 380 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
SNRPF-203ENST00000551316 FXYD7P58549 80 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 BRWD1-AS2P59051 145 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 ERVFC1-1P60608 527 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 UNC119Q13432 240 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 TMED1Q13445 227 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 SYS1Q8N2H4 156 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 OR8J1Q8NGP2 316 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 SCARB1Q8WTV0 552 aa9.23□□□□□ -0.93
SNRPF-203ENST00000551316 A0A1W2PPK0 400 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 B2RBV5 119 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 K7EIM0 57 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 BET1O15155 118 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 FAM107AO95990 144 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 MT1HL1P0DM35 61 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 DAD1P61803 113 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 PAFAH1B2P68402 229 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 ARFRP1Q13795 201 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 SPSB3Q6PJ21 355 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 LRRTM1Q86UE6 522 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 GGHQ92820 318 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 CCDC124Q96CT7 223 aaKnown RBP9.22□□□□□ -0.93
SNRPF-203ENST00000551316 DGCR14Q96DF8 476 aaKnown RBP9.22□□□□□ -0.93
SNRPF-203ENST00000551316 TMEM70Q9BUB7 260 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 FNDC4Q9H6D8 234 aaPredicted RBP9.22□□□□□ -0.93
SNRPF-203ENST00000551316 C21orf62Q9NYP8 219 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 RFNGQ9Y644 331 aa9.22□□□□□ -0.93
SNRPF-203ENST00000551316 TRAV2A0A0B4J234 112 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 TRAV3A0A0B4J244 114 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 TRBV5-5A0A0J9YX44 114 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 TMEM189A5PLL7 270 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 HMGB1P1B2RPK0 211 aaPredicted RBP9.21□□□□□ -0.94
SNRPF-203ENST00000551316 YIF1AO95070 293 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 CRHBPP24387 322 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 DEFB1P60022 68 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 GSG1LQ6UXU4 331 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 STXBP6Q8NFX7 210 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 DCANP1Q8TF63 244 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 RNF125Q96EQ8 232 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 DCUN1D5Q9BTE7 237 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 TM2D1Q9BX74 207 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 IMPAD1Q9NX62 359 aa9.21□□□□□ -0.94
SNRPF-203ENST00000551316 EXOGQ9Y2C4 368 aaKnown RBP9.21□□□□□ -0.94
SNRPF-203ENST00000551316 TRAV14DV4A0A0A6YYC5 116 aa9.2□□□□□ -0.94
SNRPF-203ENST00000551316 RPS11P62280 158 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNRPF-203ENST00000551316 RPL11P62913 178 aaKnown RBP9.2□□□□□ -0.94
SNRPF-203ENST00000551316 WT1-ASQ06250 92 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms