RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 TMEM56-RWDD3S4R434 201 aa2.53□□□□□ -2
USP15-213ENST00000549268 NLRC5Q86WI3 1866 aa2.53□□□□□ -2
USP15-213ENST00000549268 HECW1Q76N89 1606 aa2.53□□□□□ -2
USP15-213ENST00000549268 DSCAMO60469 2012 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 ABCC12Q96J65 1359 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 COL18A1P39060 1754 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 hCG_1818297A0A087WSY0 165 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 A8MT66 165 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 OR11H12B2RN74 326 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 GGTLC3B5MD39 225 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 I3L521 148 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 LY6HO94772 140 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 ZNF682O95780 498 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 C1QBP02746 253 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 P0C880 135 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 SULT1A3P0DMM9 295 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 SULT1A4P0DMN0 295 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 CPMP14384 443 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 CBR1P16152 277 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 GABRA2P47869 451 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 FOXA1P55317 472 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 DEFA3P59666 94 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 TNFRSF9Q07011 255 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 FAM229BQ4G0N7 80 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 ZFAND6Q6FIF0 208 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 SMARCD3Q6STE5 483 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 C12orf45Q8N5I9 185 aaPredicted RBP2.52□□□□□ -2.01
USP15-213ENST00000549268 EIF4E3Q8N5X7 224 aaKnown RBP2.52□□□□□ -2.01
USP15-213ENST00000549268 OR11H2Q8NH07 326 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 OR13C6PQ8NH95 151 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 MUC7Q8TAX7 377 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 MRPL30Q8TCC3 161 aaKnown RBP2.52□□□□□ -2.01
USP15-213ENST00000549268 GNPDA2Q8TDQ7 276 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 TM2D3Q9BRN9 247 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 TMEM222Q9H0R3 208 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 C11orf68Q9H3H3 251 aaKnown RBP2.52□□□□□ -2.01
USP15-213ENST00000549268 PYCARDQ9ULZ3 195 aa2.52□□□□□ -2.01
USP15-213ENST00000549268 PTPRJQ12913 1337 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 LOC105371267A0A1B0GV96 52 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 DHRS12A0PJE2 317 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 TRAPPC13A5PLN9 417 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 PIRO00625 290 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 HMGB3O15347 200 aaKnown RBP2.51□□□□□ -2.01
USP15-213ENST00000549268 SOD1P00441 154 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 C8GP07360 202 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 SRP19P09132 144 aaKnown RBP2.51□□□□□ -2.01
USP15-213ENST00000549268 ZNF705DP0CH99 300 aaPredicted RBP2.51□□□□□ -2.01
USP15-213ENST00000549268 CRHBPP24387 322 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 SERPINB1P30740 379 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 RAB13P51153 203 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 KRTAP25-1Q3LHN0 102 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 NOXRED1Q6NXP6 359 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 SSX8Q7RTT4 187 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 LYPD6Q86Y78 171 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.51□□□□□ -2.01
USP15-213ENST00000549268 Q8NAQ8 132 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 RASSF5Q8WWW0 418 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 KLF6Q99612 283 aaPredicted RBP2.51□□□□□ -2.01
USP15-213ENST00000549268 PARVBQ9HBI1 364 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 BIN3Q9NQY0 253 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 ASF1BQ9NVP2 202 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 CACNA1SQ13698 1873 aa2.51□□□□□ -2.01
USP15-213ENST00000549268 TRPM3Q9HCF6 1732 aaPredicted RBP2.51□□□□□ -2.01
USP15-213ENST00000549268 RTL1A6NKG5 1358 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 NID2Q14112 1375 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 DOCK5Q9H7D0 1870 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 SYNMO15061 1565 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 IGKV1D-43A0A0B4J1Z2 117 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 A0A1B0GU33 70 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 LOC102725191A0A1B0GVB3 256 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 TMEM269A0A1B0GVZ9 245 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 C17orf98A8MV24 154 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 NDUFB2O95178 105 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 IFNA21P01568 189 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 COL8A2P25067 703 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 ERP29P30040 261 aaKnown RBP2.5□□□□□ -2.01
USP15-213ENST00000549268 RPL27AP46776 148 aaKnown RBP2.5□□□□□ -2.01
USP15-213ENST00000549268 RPL30P62888 115 aaKnown RBP2.5□□□□□ -2.01
USP15-213ENST00000549268 MEF2BQ02080 365 aaPredicted RBP2.5□□□□□ -2.01
USP15-213ENST00000549268 HTR4Q13639 388 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 PYDC2Q56P42 97 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 ZNF322Q6U7Q0 402 aaPredicted RBP2.5□□□□□ -2.01
USP15-213ENST00000549268 CNEP1R1Q8N9A8 125 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 OR10P1Q8NGE3 313 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 ZHX1-C8orf76Q96EF9 292 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 DDA1Q9BW61 102 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 TTTY13Q9BZ97 58 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 CCDC90BQ9GZT6 254 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 SMDT1Q9H4I9 107 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 EFCAB1Q9HAE3 211 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 MED29Q9NX70 200 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 TP73-AS1Q9UF72 201 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 CYSLTR1Q9Y271 337 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 SLC35A3Q9Y2D2 325 aa2.5□□□□□ -2.01
USP15-213ENST00000549268 DOCK3Q8IZD9 2030 aa2.49□□□□□ -2.01
USP15-213ENST00000549268 TRIOBPQ9H2D6 2365 aa2.49□□□□□ -2.01
USP15-213ENST00000549268 IGHV3-73A0A0B4J1V6 119 aa2.49□□□□□ -2.01
USP15-213ENST00000549268 A0A1B0GW54 56 aa2.49□□□□□ -2.01
USP15-213ENST00000549268 DPRXA6NFQ7 191 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms