RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 C9orf163Q8N9P6 203 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 OR5B17Q8NGF7 314 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 HAVCR2Q8TDQ0 301 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 REG4Q9BYZ8 158 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 XAGE1AQ9HD64 81 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 GPR84Q9NQS5 396 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 EURLQ9NYK6 297 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 PRELID1Q9Y255 219 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 C22orf24Q9Y442 160 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 TIMM22Q9Y584 194 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 PTPRSQ13332 1948 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 CLASP1Q7Z460 1538 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 PRUNE2Q8WUY3 3088 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 LAMA3Q16787 3333 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 SCAF11Q99590 1463 aaKnown RBP0.56□□□□□ -2.32
CCDC38-206ENST00000548771 RANBP2P49792 3224 aaKnown RBP0.56□□□□□ -2.32
CCDC38-206ENST00000548771 IBA57-AS1B1ANH7 110 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 LEPROTO15243 131 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 NSA2O95478 260 aaKnown RBP0.56□□□□□ -2.32
CCDC38-206ENST00000548771 PRB4P10163 310 aaPredicted RBP0.56□□□□□ -2.32
CCDC38-206ENST00000548771 RAB13P51153 203 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 CDK10Q15131 360 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 NDUFA5Q16718 116 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 FAM27BQ5VT28 67 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 FAM78BQ5VT40 261 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 SSX8Q7RTT4 187 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 FAM19A5Q7Z5A7 132 aaPredicted RBP0.56□□□□□ -2.32
CCDC38-206ENST00000548771 FUNDC1Q8IVP5 155 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 EEF1AKMT1Q8WVE0 214 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 SERPINI1Q99574 410 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 DHRS9Q9BPW9 319 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 BBS2Q9BXC9 721 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 SPACA1Q9HBV2 294 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 DIP2BQ9P265 1576 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 DNHD1Q96M86 4753 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 ZFHX3Q15911 3703 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 SMARCA4P51532 1647 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 ARFGEF3Q5TH69 2177 aa0.56□□□□□ -2.32
CCDC38-206ENST00000548771 CHD1O14646 1710 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 ROS1P08922 2347 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 TRANK1O15050 2925 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 GAPVD1Q14C86 1478 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 ABCC10Q5T3U5 1492 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 BCL9LQ86UU0 1499 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 MRC2Q9UBG0 1479 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 DCHS1Q96JQ0 3298 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 NISCHQ9Y2I1 1504 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 C5orf42Q9H799 3197 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 IQCF5A8MTL0 148 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 I3L521 148 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 ITGB1BP1O14713 200 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 SLC22A1O15245 554 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 HCRTO43612 131 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 IL3P08700 152 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 S100A7P31151 101 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 CDC34P49427 236 aaPredicted RBP0.55□□□□□ -2.32
CCDC38-206ENST00000548771 POLR2GP62487 172 aaKnown RBP eCLIP0.55□□□□□ -2.32
CCDC38-206ENST00000548771 SLC51BQ86UW2 128 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 SLC22A24Q8N4F4 322 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 TMEM251Q8N6I4 163 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 SGMS2Q8NHU3 365 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 JOSD2Q8TAC2 188 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 DNAJB3Q8WWF6 145 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 C7orf50Q9BRJ6 194 aaKnown RBP0.55□□□□□ -2.32
CCDC38-206ENST00000548771 FKBP14Q9NWM8 211 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 AK3Q9UIJ7 227 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 LRP5O75197 1615 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 PCLOQ9Y6V0 5065 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 UBR4Q5T4S7 5183 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 HEATR5BQ9P2D3 2071 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 REV3LO60673 3130 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 ASPMQ8IZT6 3477 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 USP34Q70CQ2 3546 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 SETD5Q9C0A6 1442 aa0.55□□□□□ -2.32
CCDC38-206ENST00000548771 DMDP11532 3685 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 SHANK2Q9UPX8 1470 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 XIRP2A4UGR9 3374 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 POLEQ07864 2286 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 URB2Q14146 1524 aaKnown RBP0.54□□□□□ -2.32
CCDC38-206ENST00000548771 KIF21BO75037 1637 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 MADDQ8WXG6 1647 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 PKD1L2Q7Z442 2459 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 TRAV14DV4A0A0A6YYC5 116 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 TRBV10-2A0A0K0K1G8 114 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 FABP12A6NFH5 140 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 TMEM212A6NML5 194 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 TRAPPC2LH3BP13 241 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 GEMIN2O14893 280 aaKnown RBP0.54□□□□□ -2.32
CCDC38-206ENST00000548771 BIRC5O15392 142 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 PMP2P02689 132 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 OCMP0CE72 109 aaPredicted RBP0.54□□□□□ -2.32
CCDC38-206ENST00000548771 SULT1A3P0DMM9 295 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 SULT1A4P0DMN0 295 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 HLA-DMBP28068 263 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 OR4D2P58180 307 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 PPP1R1AQ13522 171 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 TNFAIP8L3Q5GJ75 292 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 C10orf55Q5SWW7 151 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 TNFAIP8L2Q6P589 184 aaPredicted RBP0.54□□□□□ -2.32
CCDC38-206ENST00000548771 C5orf46Q6UWT4 87 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms