RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 RSL24D1Q9UHA3 163 aaKnown RBP0.68□□□□□ -2.3
CCDC38-204ENST00000546816 NAT8Q9UHE5 227 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 ATP6V1DQ9Y5K8 247 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 PXMP4Q9Y6I8 212 aa0.68□□□□□ -2.3
CCDC38-204ENST00000546816 ZFHX2Q9C0A1 2572 aaPredicted RBP0.68□□□□□ -2.3
CCDC38-204ENST00000546816 NUMA1Q14980 2115 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 FBN2P35556 2912 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 IGKV3D-7A0A0C4DH55 119 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 IGKV3OR2-268A0A0C4DH90 116 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 TRAPPC13A5PLN9 417 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 MEIS3P1A6NDR6 274 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 C21orf140B9A014 251 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 CETN3O15182 167 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 LEPROTO15243 131 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 SLC16A4O15374 487 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 APOEP02649 317 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 PPBPP02775 128 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 OCM2P0CE71 109 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 MYL12AP19105 171 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 MSNP26038 577 aaKnown RBP0.67□□□□□ -2.3
CCDC38-204ENST00000546816 MAP2K4P45985 399 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 REG1BP48304 166 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 EVX1P49640 407 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 EMX1Q04741 257 aaPredicted RBP0.67□□□□□ -2.3
CCDC38-204ENST00000546816 RSU1Q15404 277 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 BATFQ16520 125 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 CLVS2Q5SYC1 327 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 C1orf195Q5TG92 126 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 FAM27BQ5VT28 67 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 TBC1D19Q8N5T2 526 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 DEFB125Q8N687 156 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 OR1M1Q8NGA1 313 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 MBD3L1Q8WWY6 194 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 DIRAS2Q96HU8 199 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 CST9LQ9H4G1 147 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 FKBP14Q9NWM8 211 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 C3orf18Q9UK00 162 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 ANGPT4Q9Y264 503 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 TIMM22Q9Y584 194 aa0.67□□□□□ -2.3
CCDC38-204ENST00000546816 EVPLLA8MZ36 301 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 IBA57-AS1B1ANH7 110 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 H0Y980 276 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 I3L521 148 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 M0QZ92 97 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 DEXIO95424 95 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 CRPP02741 224 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 C1QAP02745 245 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 KRT7P08729 469 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 RPSAP08865 295 aaKnown RBP0.66□□□□□ -2.3
CCDC38-204ENST00000546816 FAM228BP0C875 321 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 MAGEA2P43356 314 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 CSN1S1P47710 185 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 MARCKSL1P49006 195 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 RAB13P51153 203 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 OR4D2P58180 307 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 NAA20P61599 178 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 PRB3Q04118 309 aaPredicted RBP0.66□□□□□ -2.3
CCDC38-204ENST00000546816 C9orf64Q5T6V5 341 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 SFXN4Q6P4A7 337 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 FAM173BQ6P4H8 233 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 TMEM86AQ8N2M4 240 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 GPR32P1Q8NGA4 272 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 ACOT12Q8WYK0 555 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 ANKRD7Q92527 254 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 RAB8BQ92930 207 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 ROPN1LQ96C74 230 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 MED9Q9NWA0 146 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 USE1Q9NZ43 259 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 LHFPL6Q9Y693 200 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 CPAMD8Q8IZJ3 1885 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
CCDC38-204ENST00000546816 DLG5Q8TDM6 1919 aa0.66□□□□□ -2.3
CCDC38-204ENST00000546816 MICAL3Q7RTP6 2002 aa0.65□□□□□ -2.3
CCDC38-204ENST00000546816 DCCP43146 1447 aa0.65□□□□□ -2.3
CCDC38-204ENST00000546816 TRBV10-2A0A0K0K1G8 114 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 LRRN3E7EW58 273 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 ORC5O43913 435 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 SRP19P09132 144 aaKnown RBP0.65□□□□□ -2.31
CCDC38-204ENST00000546816 TRGC1P0CF51 173 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 SULT1A3P0DMM9 295 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 SULT1A4P0DMN0 295 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 FGF6P10767 208 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 RPS12P25398 132 aaKnown RBP0.65□□□□□ -2.31
CCDC38-204ENST00000546816 HLA-DMBP28068 263 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 S100A7P31151 101 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 HAAOP46952 286 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 RAB5BP61020 215 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 CAV1Q03135 178 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 FABP9Q0Z7S8 132 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 ELOBQ15370 118 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 OGFRL1Q5TC84 451 aaPredicted RBP0.65□□□□□ -2.31
CCDC38-204ENST00000546816 GID4Q8IVV7 300 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 Q8N2B8 174 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 ZNF676Q8N7Q3 588 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 TESCQ96BS2 214 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 DRC3Q9H069 523 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 FGFR1OP2Q9NVK5 253 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 PAQR5Q9NXK6 330 aaPredicted RBP0.65□□□□□ -2.31
CCDC38-204ENST00000546816 FUT9Q9Y231 359 aa0.65□□□□□ -2.31
CCDC38-204ENST00000546816 PTPRSQ13332 1948 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms