RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 HBG2P69892 147 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 GCSAMLQ5JQS6 135 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 ADTRPQ96IZ2 230 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 TMA7Q9Y2S6 64 aaKnown RBP11.04□□□□□ -0.64
HCFC2-202ENST00000544223 A0A087X0M5 115 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 PIGBOS1A0A0B4J2F0 54 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 A0A1B0GW64 132 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 A0A1B0GX30 115 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 TSPAN15O95858 294 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 IGKV1D-33P01593 117 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 IGKV1-33P01594 117 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 IGLV2-23P01705 113 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 IFNA4P05014 189 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 RAB13P51153 203 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 TAS2R30P59541 319 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 LY6G5BQ8NDX9 201 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 OR10P1Q8NGE3 313 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 SCGB1C1Q8TD33 95 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 TMEM186Q96B77 213 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 PERPQ96FX8 193 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 CCL19Q99731 98 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 RPRMQ9NS64 109 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 INSIG2Q9Y5U4 225 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 CCDC168Q8NDH2 2452 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 TLN2Q9Y4G6 2542 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 IGHV1-3A0A0C4DH29 117 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 UPK2O00526 184 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 CA2P00918 260 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 DEFA5Q01523 94 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 HCP5Q6MZN7 132 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 DYNAPQ8N1N2 210 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 CLDND2Q8NHS1 167 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 SFT2D1Q8WV19 159 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 TSNAXQ99598 290 aaKnown RBP11.03□□□□□ -0.64
HCFC2-202ENST00000544223 WDR61Q9GZS3 305 aaKnown RBP11.03□□□□□ -0.64
HCFC2-202ENST00000544223 ZNF430Q9H8G1 570 aaPredicted RBP11.03□□□□□ -0.64
HCFC2-202ENST00000544223 PARP11Q9NR21 331 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 IGHV3OR16-10A0A075B7F0 116 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 OVOL3O00110 214 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 KBTBD11O94819 623 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 FBP1P09467 338 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 M6PRP20645 277 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 FGF7P21781 194 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 RAB2AP61019 212 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 GNB1P62873 340 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 ZNF726P1Q15940 193 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 LRRC75BQ2VPJ9 315 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 LCN15Q6UWW0 184 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 ETV3LQ6ZN32 361 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 VMO1Q7Z5L0 202 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 TAF15Q92804 592 aaKnown RBP eCLIP11.03□□□□□ -0.64
HCFC2-202ENST00000544223 RAB39BQ96DA2 213 aa11.03□□□□□ -0.64
HCFC2-202ENST00000544223 SAT2Q96F10 170 aaPredicted RBP11.03□□□□□ -0.64
HCFC2-202ENST00000544223 DFFBO76075 338 aa11.02□□□□□ -0.64
HCFC2-202ENST00000544223 OR8U8P0C7N1 319 aa11.02□□□□□ -0.64
HCFC2-202ENST00000544223 ZP3P21754 424 aa11.02□□□□□ -0.64
HCFC2-202ENST00000544223 HSPE1P61604 102 aaKnown RBP11.02□□□□□ -0.64
HCFC2-202ENST00000544223 SSX2Q16385 188 aa11.02□□□□□ -0.64
HCFC2-202ENST00000544223 GUCA2BQ16661 112 aa11.02□□□□□ -0.64
HCFC2-202ENST00000544223 ACSM6Q6P461 480 aa11.02□□□□□ -0.64
HCFC2-202ENST00000544223 LINC00311Q8N616 119 aa11.02□□□□□ -0.64
HCFC2-202ENST00000544223 OR4C13Q8NGP0 309 aa11.02□□□□□ -0.64
HCFC2-202ENST00000544223 ZNF596Q8TC21 504 aa11.02□□□□□ -0.64
HCFC2-202ENST00000544223 HIPK2Q9H2X6 1198 aa11.02□□□□□ -0.64
HCFC2-202ENST00000544223 FOXA2Q9Y261 457 aaPredicted RBP11.02□□□□□ -0.64
HCFC2-202ENST00000544223 CGB1A6NKQ9 187 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 TIMM23O14925 209 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 IGHV2-5P01817 119 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 F2RL1P55085 397 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 MRGPRG-AS1Q2M3A8 158 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 AKR1C8PQ5T2L2 129 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 HIST2H2BCQ6DN03 193 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 CCDC28AQ8IWP9 274 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 C8orf46Q8TAG6 207 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 RPEQ96AT9 228 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 EIF5A2Q9GZV4 153 aaKnown RBP11.02□□□□□ -0.65
HCFC2-202ENST00000544223 WASHC3Q9Y3C0 194 aa11.02□□□□□ -0.65
HCFC2-202ENST00000544223 FAM157AC9JC47 383 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 FCN1O00602 326 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 PRRX1P54821 245 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 LMO4P61968 165 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 HAGHQ16775 308 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 TMEM30BQ3MIR4 351 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 ZNF429Q86V71 674 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 UQCC1Q9NVA1 299 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 RNASEK-C17orf49H0YIS7 233 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 IL6RP08887 468 aaPredicted RBP11.01□□□□□ -0.65
HCFC2-202ENST00000544223 CEBPGP53567 150 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 BLOC1S1P78537 153 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 AARDQ4LEZ3 155 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 TMEM177Q53S58 311 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 RUSC1-AS1Q66K80 236 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 SPSB3Q6PJ21 355 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 PUSL1Q8N0Z8 303 aaKnown RBP11.01□□□□□ -0.65
HCFC2-202ENST00000544223 EIF4E3Q8N5X7 224 aaKnown RBP11.01□□□□□ -0.65
HCFC2-202ENST00000544223 C1orf159Q96HA4 380 aa11.01□□□□□ -0.65
HCFC2-202ENST00000544223 CIB3Q96Q77 187 aaPredicted RBP11.01□□□□□ -0.65
HCFC2-202ENST00000544223 IGHV3-21A0A0B4J1V1 117 aa11□□□□□ -0.65
HCFC2-202ENST00000544223 SNCAP37840 140 aa11□□□□□ -0.65
HCFC2-202ENST00000544223 PPT1P50897 306 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms