RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 TMEM140Q9NV12 185 aa13.32□□□□□ -0.28
LTBR-210ENST00000542830 FBXL7Q9UJT9 491 aa13.32□□□□□ -0.28
LTBR-210ENST00000542830 GPR31O00270 319 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 HPGDSO60760 199 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 PGLYRP1O75594 196 aaPredicted RBP13.31□□□□□ -0.28
LTBR-210ENST00000542830 S1PR2O95136 353 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 RLN1P04808 185 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 CSN3P07498 182 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 DEFA4P12838 97 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 AREGP15514 252 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 ELK1P19419 428 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 S100GP29377 79 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 RCVRNP35243 200 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 TSPAN5P62079 268 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 KLK9Q2XQG4 91 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 THOC7Q6I9Y2 204 aaKnown RBP13.31□□□□□ -0.28
LTBR-210ENST00000542830 LPCAT3Q6P1A2 487 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 SNX29P2Q8IUI4 249 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 FANCD2OSQ96PS1 177 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 FXYD6Q9H0Q3 95 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 KLK9Q9UKQ9 250 aa13.31□□□□□ -0.28
LTBR-210ENST00000542830 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
LTBR-210ENST00000542830 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
LTBR-210ENST00000542830 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
LTBR-210ENST00000542830 GGCTO75223 188 aaKnown RBP13.3□□□□□ -0.28
LTBR-210ENST00000542830 ZNF182P17025 639 aaPredicted RBP13.3□□□□□ -0.28
LTBR-210ENST00000542830 OR2B8PP59922 312 aa13.3□□□□□ -0.28
LTBR-210ENST00000542830 CTF1Q16619 201 aa13.3□□□□□ -0.28
LTBR-210ENST00000542830 LCN12Q6JVE5 192 aa13.3□□□□□ -0.28
LTBR-210ENST00000542830 CADM3Q8N126 398 aa13.3□□□□□ -0.28
LTBR-210ENST00000542830 Q8N402 240 aa13.3□□□□□ -0.28
LTBR-210ENST00000542830 EEF1AKMT3Q96AZ1 226 aa13.3□□□□□ -0.28
LTBR-210ENST00000542830 DGCR14Q96DF8 476 aaKnown RBP13.3□□□□□ -0.28
LTBR-210ENST00000542830 QTRT1Q9BXR0 403 aaKnown RBP13.3□□□□□ -0.28
LTBR-210ENST00000542830 MRPS26Q9BYN8 205 aaKnown RBP13.3□□□□□ -0.28
LTBR-210ENST00000542830 CGB1A6NKQ9 187 aa13.29□□□□□ -0.28
LTBR-210ENST00000542830 MARCH11A6NNE9 402 aa13.29□□□□□ -0.28
LTBR-210ENST00000542830 FRMD6-AS1P0C7T7 363 aa13.29□□□□□ -0.28
LTBR-210ENST00000542830 MYOD1P15172 320 aa13.29□□□□□ -0.28
LTBR-210ENST00000542830 HSD17B13Q7Z5P4 300 aaPredicted RBP13.29□□□□□ -0.28
LTBR-210ENST00000542830 SGPP2Q8IWX5 399 aa13.29□□□□□ -0.28
LTBR-210ENST00000542830 OR2K2Q8NGT1 345 aa13.29□□□□□ -0.28
LTBR-210ENST00000542830 NAA50Q9GZZ1 169 aaKnown RBP13.29□□□□□ -0.28
LTBR-210ENST00000542830 IGLV11-55A0A075B6I3 123 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 TRAV3A0A0B4J244 114 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 CYB5BO43169 146 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 TPPPO94811 219 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 NDUFB8O95169 186 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 REG1AP05451 166 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 LPAR6P43657 344 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 GPR107Q5VW38 600 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 C19orf35Q6ZS72 473 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 FCAMRQ8WWV6 532 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 CXorf58Q96LI9 332 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 FAM212BQ9NTI7 297 aaPredicted RBP13.28□□□□□ -0.28
LTBR-210ENST00000542830 THYN1Q9P016 225 aa13.28□□□□□ -0.28
LTBR-210ENST00000542830 TRBV7-1A0A0A6YYK4 115 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 IGLC7A0M8Q6 106 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 A8MZ25 164 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 PPP5D1E7EU14 171 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 LGALS9O00182 355 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 UCP3P55916 312 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 GPR141Q7Z602 305 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 GPHB5Q86YW7 130 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 SBSPONQ8IVN8 264 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 SLC38A6Q8IZM9 456 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 Q8N1Y9 231 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 OR1L8Q8NGR8 309 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 C15orf40Q8WUR7 153 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 CCDC140Q96MF4 163 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 DMRT1Q9Y5R6 373 aa13.27□□□□□ -0.29
LTBR-210ENST00000542830 SNAPC5O75971 98 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 KRASP01116 189 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 TRAPPC2P0DI81 140 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 TRAPPC2BP0DI82 140 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 IGHV4-30-4P0DP06 118 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 RPA2P15927 270 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 ARL3P36405 182 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 MECP2P51608 486 aaKnown RBP13.26□□□□□ -0.29
LTBR-210ENST00000542830 ZNF585BQ52M93 769 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 PHLDA2Q53GA4 152 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 CLEC19AQ6UXS0 136 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 GTSCR1Q86UQ5 136 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 TSC22D3Q99576 134 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 ZMAT4Q9H898 229 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 EXTL2Q9UBQ6 330 aa13.26□□□□□ -0.29
LTBR-210ENST00000542830 OR2C1O95371 312 aa13.25□□□□□ -0.29
LTBR-210ENST00000542830 IGHV3-23P01764 117 aa13.25□□□□□ -0.29
LTBR-210ENST00000542830 IFNA6P05013 189 aa13.25□□□□□ -0.29
LTBR-210ENST00000542830 G6PCP35575 357 aa13.25□□□□□ -0.29
LTBR-210ENST00000542830 ALDH3B2P48448 385 aa13.25□□□□□ -0.29
LTBR-210ENST00000542830 FAM106AQ4KMX7 169 aa13.25□□□□□ -0.29
LTBR-210ENST00000542830 GDPD1Q8N9F7 314 aa13.25□□□□□ -0.29
LTBR-210ENST00000542830 DYNLRB2Q8TF09 96 aa13.25□□□□□ -0.29
LTBR-210ENST00000542830 FKBP11Q9NYL4 201 aa13.25□□□□□ -0.29
LTBR-210ENST00000542830 PRNDQ9UKY0 176 aa13.25□□□□□ -0.29
LTBR-210ENST00000542830 HUWE1Q7Z6Z7 4374 aaKnown RBP13.25□□□□□ -0.29
LTBR-210ENST00000542830 TEX50A0A1B0GTY4 177 aa13.24□□□□□ -0.29
LTBR-210ENST00000542830 C2orf70A6NJV1 201 aa13.24□□□□□ -0.29
LTBR-210ENST00000542830 HLA-AP01891 365 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms