RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 MT-ATP8P03928 68 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 IGLL1P15814 213 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 IL13RA2Q14627 380 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 IGFBP7Q16270 282 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 FADS6Q8N9I5 356 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 ST6GALNAC6Q969X2 333 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 SPACA5Q96QH8 159 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 SPAG8Q99932 426 aaPredicted RBP9.33□□□□□ -0.92
CDH3-203ENST00000542274 GTF3C1Q12789 2109 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 C9orf118A6NHY6 69 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 RER1O15258 196 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 TMEM50AO95807 157 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 ADMP35318 185 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 CLRN1P58418 232 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 SRSF2Q01130 221 aaKnown RBP9.33□□□□□ -0.92
CDH3-203ENST00000542274 FAM162BQ5T6X4 162 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 SCCPDHQ8NBX0 429 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 OR4F5Q8NH21 305 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 C8orf46Q8TAG6 207 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 RTN4IP1Q8WWV3 396 aaPredicted RBP9.33□□□□□ -0.92
CDH3-203ENST00000542274 LHFPL6Q9Y693 200 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 R4GMQ9 66 aa9.33□□□□□ -0.92
CDH3-203ENST00000542274 IGLV3-32A0A0A0MS00 114 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 BORCS7-ASMTA0A0B4J1R7 106 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 H2BFMP0C1H6 154 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 PRSS3P35030 304 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 NKX2-1P43699 371 aaPredicted RBP9.32□□□□□ -0.92
CDH3-203ENST00000542274 GRB2P62993 217 aaKnown RBP9.32□□□□□ -0.92
CDH3-203ENST00000542274 GLYATL3Q5SZD4 288 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 STUMQ69YW2 141 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 PLXDC2Q6UX71 529 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 ADAMTSL5Q6ZMM2 481 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 MOB1BQ7L9L4 216 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 PLPPR1Q8TBJ4 325 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 NAT8BQ9UHF3 227 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 SPCS1Q9Y6A9 102 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 NCKAP5O14513 1909 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 NCOA6Q14686 2063 aaPredicted RBP9.32□□□□□ -0.92
CDH3-203ENST00000542274 AKAP13Q12802 2813 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 TRAV9-2A0A087WT02 112 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 E9PLN8 166 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 TMPRSS2O15393 492 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 CLDN17P56750 224 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 RPS19BP1Q86WX3 136 aaKnown RBP9.32□□□□□ -0.92
CDH3-203ENST00000542274 OSR2Q8N2R0 312 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 OR10AG1Q8NH19 301 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 CLDND2Q8NHS1 167 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 FAM3DQ96BQ1 224 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 SPIN2AQ99865 258 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 SPIN2BQ9BPZ2 258 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 POLR1DQ9Y2S0 133 aa9.32□□□□□ -0.92
CDH3-203ENST00000542274 PTPRBP23467 1997 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 TRAV18A0A075B6X5 111 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 ZIC3O60481 467 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 GPX1P07203 203 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 RFPL3SP0C7P2 107 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 ZNF43P17038 809 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 ZNF121P58317 390 aaPredicted RBP9.31□□□□□ -0.92
CDH3-203ENST00000542274 ATP1A1-AS1Q5TC04 95 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 NKD1Q969G9 470 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 MBD6Q96DN6 1003 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 ZNF837Q96EG3 531 aaPredicted RBP9.31□□□□□ -0.92
CDH3-203ENST00000542274 ADAT3Q96EY9 351 aaPredicted RBP9.31□□□□□ -0.92
CDH3-203ENST00000542274 WDYHV1Q96HA8 205 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 TM2D2Q9BX73 214 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 PMCHP20382 165 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 SSR4P51571 173 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 RHOBP62745 196 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 FOXE3Q13461 319 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 EFNB3Q15768 340 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 TMEM78Q5T7P6 136 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 BAGE3Q86Y29 109 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 BAGE2Q86Y30 109 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 TMEM123Q8N131 208 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 TMEM229BQ8NBD8 167 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 OR9G4Q8NGQ1 327 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 SSC4DQ8WTU2 575 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 OXGR1Q96P68 337 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 FAM206AQ9NX38 181 aa9.31□□□□□ -0.92
CDH3-203ENST00000542274 SIRPB1O00241 398 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 TNFSF11O14788 317 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 RTP5Q14D33 572 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 PMCHL1Q16048 86 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 TIMM23BQ5SRD1 257 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 TTC9CQ8N5M4 171 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 OR10D3Q8NH80 312 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 KIR2DL5BQ8NHK3 375 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 SPANXB1Q9NS25 103 aaPredicted RBP9.3□□□□□ -0.92
CDH3-203ENST00000542274 ANXA10Q9UJ72 324 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 ZNF816-ZNF321PA0A0X1KG74 233 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 LRP5LA4QPB2 252 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 SLC17A2O00624 439 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 IGHG1P01857 330 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 LIFP15018 202 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 IL3RAP26951 378 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 PRSS12P56730 875 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 POU2AF1Q16633 256 aa9.3□□□□□ -0.92
CDH3-203ENST00000542274 ACSF3Q4G176 576 aaPredicted RBP9.3□□□□□ -0.92
CDH3-203ENST00000542274 MRPL54Q6P161 138 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms