RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 DNLZQ5SXM8 178 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 ZNRF1Q8ND25 227 aa12.73□□□□□ -0.37
CNOT9-208ENST00000542068 CIB3Q96Q77 187 aaPredicted RBP12.73□□□□□ -0.37
CNOT9-208ENST00000542068 SERF1AO75920 110 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 HPRT1P00492 218 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 ERVFC1-1P60608 527 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
CNOT9-208ENST00000542068 GCM1Q9NP62 436 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 ELOVL5Q9NYP7 299 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 WIPI2Q9Y4P8 454 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 OOEPA6NGQ2 149 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 FCN1O00602 326 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 FXYD3Q14802 87 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 ZNF146Q15072 292 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 GABRA6Q16445 453 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 Q8IYB0 196 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 YTHDF2Q9Y5A9 579 aaKnown RBP12.72□□□□□ -0.37
CNOT9-208ENST00000542068 SMG1Q96Q15 3661 aaKnown RBP12.72□□□□□ -0.37
CNOT9-208ENST00000542068 CRISP2P16562 243 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 ZNF718Q3SXZ3 478 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 ACSF3Q4G176 576 aaPredicted RBP12.72□□□□□ -0.37
CNOT9-208ENST00000542068 UTF1Q5T230 341 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 SEPSECSQ9HD40 501 aaKnown RBP12.72□□□□□ -0.37
CNOT9-208ENST00000542068 PPIAL4AQ9Y536 164 aa12.72□□□□□ -0.37
CNOT9-208ENST00000542068 IGF2RP11717 2491 aa12.71□□□□□ -0.37
CNOT9-208ENST00000542068 RAB29O14966 203 aa12.71□□□□□ -0.37
CNOT9-208ENST00000542068 TFPI2P48307 235 aa12.71□□□□□ -0.37
CNOT9-208ENST00000542068 NEU1Q99519 415 aa12.71□□□□□ -0.37
CNOT9-208ENST00000542068 MRPL18Q9H0U6 180 aaKnown RBP12.71□□□□□ -0.37
CNOT9-208ENST00000542068 AKAP13Q12802 2813 aa12.71□□□□□ -0.37
CNOT9-208ENST00000542068 PDE6DO43924 150 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 VENTXO95231 258 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 OR10J1P30954 320 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 TIMP3P35625 211 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 PDLIM4P50479 330 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 RPL31P62899 125 aaKnown RBP12.71□□□□□ -0.38
CNOT9-208ENST00000542068 TREML4Q6UXN2 200 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 Q6ZWC4 215 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 RPRMLQ8N4K4 120 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 OR4P4Q8NGL7 312 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 OR1L6Q8NGR2 347 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 TAAR6Q96RI8 345 aa12.71□□□□□ -0.38
CNOT9-208ENST00000542068 GATA2P23769 480 aaPredicted RBP12.7□□□□□ -0.38
CNOT9-208ENST00000542068 C21orf62-AS1Q17RA5 79 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 CENPVQ7Z7K6 275 aaPredicted RBP12.7□□□□□ -0.38
CNOT9-208ENST00000542068 MGST2Q99735 147 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 SNURFLB1AK76 121 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 Q6ZT83 130 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 OR8I2Q8N0Y5 310 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 BEND2Q8NDZ0 799 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 SARAFQ96BY9 339 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 PARD6GQ9BYG4 376 aaPredicted RBP12.7□□□□□ -0.38
CNOT9-208ENST00000542068 SERTAD4Q9NUC0 356 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 PROCRQ9UNN8 238 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 IRF2P14316 349 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 PMCHP20382 165 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 KIR2DL2P43627 348 aaPredicted RBP12.7□□□□□ -0.38
CNOT9-208ENST00000542068 MOGAT3Q86VF5 341 aa12.7□□□□□ -0.38
CNOT9-208ENST00000542068 TRAV34A0A0B4J273 112 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 SPINT2O43291 252 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 KRTCAP3Q53RY4 240 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 C1orf194Q5T5A4 169 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 DOLPP1Q86YN1 238 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 ZCCHC14Q8WYQ9 949 aaKnown RBP12.69□□□□□ -0.38
CNOT9-208ENST00000542068 GP6Q9HCN6 339 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 TRAV17A0A0B4J275 112 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 TYMSP04818 313 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 WNT2P09544 360 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 P0C879 139 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 PAX1P15863 534 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 HTD2P86397 168 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 MOB3BQ86TA1 216 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 Q8N7P7 452 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 NHLRC2Q8NBF2 726 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 FAM216AQ8WUB2 273 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 KCNIP2Q9NS61 270 aa12.69□□□□□ -0.38
CNOT9-208ENST00000542068 CGAP01215 116 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 ERVK-16P61578 105 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 LCN2P80188 198 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 LBHQ53QV2 105 aaPredicted RBP12.68□□□□□ -0.38
CNOT9-208ENST00000542068 OR10J4P0C629 311 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 GNG10P50151 68 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 SMIM21Q3B7S5 101 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 PLA2G2CQ5R387 149 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 INO80CQ6PI98 192 aaPredicted RBP12.68□□□□□ -0.38
CNOT9-208ENST00000542068 ACP7Q6ZNF0 438 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 BTF3L4Q96K17 158 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 HSD17B10Q99714 261 aaKnown RBP12.68□□□□□ -0.38
CNOT9-208ENST00000542068 GGTLC1Q9BX51 225 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 SPENQ96T58 3664 aaKnown RBP12.68□□□□□ -0.38
CNOT9-208ENST00000542068 WNK2Q9Y3S1 2297 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 K7EN84 100 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 PROP1O75360 226 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 MGST1P10620 155 aaKnown RBP12.68□□□□□ -0.38
CNOT9-208ENST00000542068 TDGF1P3P51864 188 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 MRPL54Q6P161 138 aaKnown RBP12.68□□□□□ -0.38
CNOT9-208ENST00000542068 WDR82Q6UXN9 313 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 Q8TCH9 128 aa12.68□□□□□ -0.38
CNOT9-208ENST00000542068 RNASE7Q9H1E1 156 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms