RNA–Protein interactions for RNA: ENST00000537328.5

TMEM258-204, Transcript of transmembrane protein 258, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM258, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-204ENST00000537328 C11orf42Q8N5U0 333 aa13.24□□□□□ -0.29
TMEM258-204ENST00000537328 HARBI1Q96MB7 349 aa13.24□□□□□ -0.29
TMEM258-204ENST00000537328 PMS2P5A8MQ11 134 aa13.23□□□□□ -0.29
TMEM258-204ENST00000537328 RNASEK-C17orf49H0YIS7 233 aa13.23□□□□□ -0.29
TMEM258-204ENST00000537328 SNCAP37840 140 aa13.23□□□□□ -0.29
TMEM258-204ENST00000537328 RPS16P62249 146 aaKnown RBP13.23□□□□□ -0.29
TMEM258-204ENST00000537328 TUSC1Q2TAM9 212 aa13.23□□□□□ -0.29
TMEM258-204ENST00000537328 KIR3DL3Q8N743 410 aa13.23□□□□□ -0.29
TMEM258-204ENST00000537328 RBMXL1Q96E39 390 aaKnown RBP13.23□□□□□ -0.29
TMEM258-204ENST00000537328 RNF5Q99942 180 aa13.23□□□□□ -0.29
TMEM258-204ENST00000537328 PLEKHA3Q9HB20 300 aa13.23□□□□□ -0.29
TMEM258-204ENST00000537328 ANKHD1Q8IWZ3 2542 aaKnown RBP13.22□□□□□ -0.29
TMEM258-204ENST00000537328 C15orf62A8K5M9 175 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 C19orf84I3L1E1 186 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 IGLV1-47P01700 117 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 CEACAM3P40198 252 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 DLK1P80370 383 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 PRCDQ00LT1 54 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 ETV3LQ6ZN32 361 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 TMEM167AQ8TBQ9 72 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 SPOCK3Q9BQ16 436 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 SEC11CQ9BY50 192 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 COMMD5Q9GZQ3 224 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 MS4A7Q9GZW8 240 aaPredicted RBP13.22□□□□□ -0.29
TMEM258-204ENST00000537328 KCNIP2Q9NS61 270 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 ONECUT1Q9UBC0 465 aa13.22□□□□□ -0.29
TMEM258-204ENST00000537328 TRAV3A0A0B4J244 114 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 TRAV1-1A0A0B4J248 108 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 UBE2L5PA0A1B0GUS4 154 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 A0A1W2PN81 502 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 FNDC10F2Z333 226 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 BUB1B-PAK6H3BSN5 160 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 CD5P06127 495 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 SAA1P0DJI8 122 aaPredicted RBP13.21□□□□□ -0.29
TMEM258-204ENST00000537328 CHRNA7P36544 502 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 RUNX1Q01196 453 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 TMEM41BQ5BJD5 291 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 OR1L8Q8NGR8 309 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 INSIG2Q9Y5U4 225 aa13.21□□□□□ -0.29
TMEM258-204ENST00000537328 CREBBPQ92793 2442 aa13.21□□□□□ -0.3
TMEM258-204ENST00000537328 ARID1AO14497 2285 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 F8W036 122 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 INS-IGF2F8WCM5 200 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 ENSAO43768 121 aaKnown RBP13.2□□□□□ -0.3
TMEM258-204ENST00000537328 APOC3P02656 99 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 IGKV1-16P04430 117 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 IFNA4P05014 189 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 M6PRP20645 277 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 FGF7P21781 194 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 NPY1RP25929 384 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 CD1BP29016 333 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 CDKN1AP38936 164 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 RPL8P62917 257 aaKnown RBP13.2□□□□□ -0.3
TMEM258-204ENST00000537328 ERHP84090 104 aaKnown RBP13.2□□□□□ -0.3
TMEM258-204ENST00000537328 GUK1Q16774 197 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 SPINK9Q5DT21 86 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 SVBPQ8N300 66 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 TEX45Q8NA69 505 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 SLC24A4Q8NFF2 622 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 RPEQ96AT9 228 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 KIAA1456Q9P272 454 aa13.2□□□□□ -0.3
TMEM258-204ENST00000537328 LRBAP50851 2863 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 TEX50A0A1B0GTY4 177 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 OVOL3O00110 214 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 TSPAN9O75954 239 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 PRTN3P24158 256 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 MAS1LP35410 378 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 REG1BP48304 166 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 RAB31Q13636 194 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 C10orf91Q5T1B1 145 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 OR11H6Q8NGC7 330 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 MBD3L1Q8WWY6 194 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 EIF5A2Q9GZV4 153 aaKnown RBP13.19□□□□□ -0.3
TMEM258-204ENST00000537328 ZNRD1Q9P1U0 126 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 WDR83OSQ9Y284 106 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 CARHSP1Q9Y2V2 147 aaKnown RBP13.19□□□□□ -0.3
TMEM258-204ENST00000537328 KPTNQ9Y664 436 aa13.19□□□□□ -0.3
TMEM258-204ENST00000537328 A0A1W2PPR1 153 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 SRRM4A7MD48 611 aaKnown RBP13.18□□□□□ -0.3
TMEM258-204ENST00000537328 C22orf46C9J442 243 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 AGPAT2O15120 278 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 LY6HO94772 140 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 HTR1DP28221 377 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 FHITP49789 147 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 PDLIM4P50479 330 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 SUB1P53999 127 aaKnown RBP eCLIP13.18□□□□□ -0.35e-10■■■■■ 39.7
TMEM258-204ENST00000537328 SFT2D1Q8WV19 159 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 RSG1Q9BU20 258 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 HINT2Q9BX68 163 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 UNKLQ9H9P5 680 aaKnown RBP13.18□□□□□ -0.3
TMEM258-204ENST00000537328 NPVFQ9HCQ7 196 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 ABCA12Q86UK0 2595 aa13.18□□□□□ -0.3
TMEM258-204ENST00000537328 USF3Q68DE3 2245 aa13.17□□□□□ -0.3
TMEM258-204ENST00000537328 IGHV1-3A0A0C4DH29 117 aa13.17□□□□□ -0.3
TMEM258-204ENST00000537328 OOSP1A8MZH6 123 aa13.17□□□□□ -0.3
TMEM258-204ENST00000537328 CYB5BO43169 146 aa13.17□□□□□ -0.3
TMEM258-204ENST00000537328 IFNA1P01562 189 aa13.17□□□□□ -0.3
TMEM258-204ENST00000537328 MDKP21741 143 aaPredicted RBP13.17□□□□□ -0.3
TMEM258-204ENST00000537328 COX7A1P24310 79 aa13.17□□□□□ -0.3
TMEM258-204ENST00000537328 TAGLN2P37802 199 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms