RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 BCL2P10415 239 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 HIST1H1BP16401 226 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 BRWD1-AS2P59051 145 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 SPANXN5Q5MJ07 72 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 FAM90A2PQ658T7 463 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 ZNF787Q6DD87 383 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 LILRB2Q8N423 598 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 OR52L2PQ8NGH6 319 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 SDSLQ96GA7 329 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 VSIRQ9H7M9 311 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 NAV2Q8IVL1 2488 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 MED13LQ71F56 2210 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 MALRD1Q5VYJ5 2156 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 TRAV38-1A0A0B4J264 116 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 PMS2P5A8MQ11 134 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 CYB5BO43169 146 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 RAMP3O60896 148 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 LY86O95711 162 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 IGHV4-39P01824 125 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 EDDM3BP56851 147 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 HTD2P86397 168 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 SLC38A11Q08AI6 406 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 PNRC1Q12796 327 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 NINJ1Q92982 152 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 RCC1LQ96I51 464 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 C14orf144Q96I85 54 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 PSMG3-AS1Q96PY0 264 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 URGCP-MRPS24S4R325 110 aa10.63□□□□□ -0.71
CDK5RAP3-202ENST00000536708 ODAMA1E959 279 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 CD81P60033 236 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 CR1LQ2VPA4 569 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 GFI1BQ5VTD9 330 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 FAM53AQ6NSI3 398 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 REC114Q7Z4M0 266 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 OR13A1Q8NGR1 328 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 MRGPRDQ8TDS7 321 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 NEU4Q8WWR8 484 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 RHOVQ96L33 236 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 GPR61Q9BZJ8 451 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 ZNF665Q9H7R5 613 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 TMEM242Q9NWH2 141 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 GNG13Q9P2W3 67 aa10.62□□□□□ -0.71
CDK5RAP3-202ENST00000536708 NKX6-3A6NJ46 265 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 C15orf65H3BRN8 121 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 TGOLN2O43493 480 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 IFNA10P01566 189 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 TRGC2P03986 189 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 SSTR5P35346 364 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 SNX22Q96L94 193 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 CIB3Q96Q77 187 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 HSD17B10Q99714 261 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 VAX2Q9UIW0 290 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 C17orf98A8MV24 154 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 S1PR2O95136 353 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 G6PCP35575 357 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 VWC2Q2TAL6 325 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 AARDQ4LEZ3 155 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 SSX7Q7RTT5 188 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 TCF23Q7RTU1 214 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 AGMATQ9BSE5 352 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 TMEM147Q9BVK8 224 aa10.61□□□□□ -0.71
CDK5RAP3-202ENST00000536708 TNFRSF13BO14836 293 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 MGST3O14880 152 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 KRASP01116 189 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 IFNA1P01562 189 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 TRGC1P0CF51 173 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 RND2P52198 227 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 EFNA4P52798 201 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 PKIAP61925 76 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 ZNF816Q0VGE8 651 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 GAMTQ14353 236 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 PDZD11Q5EBL8 140 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 LCN15Q6UWW0 184 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 FAM210BQ96KR6 192 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 SLC25A10Q9UBX3 287 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 SVEP1Q4LDE5 3571 aa10.6□□□□□ -0.71
CDK5RAP3-202ENST00000536708 MAP1LC3B2A6NCE7 125 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 FAM90A9PA6NNJ1 464 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 SPINT2O43291 252 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 MBP02144 154 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 NDUFB7P17568 137 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 GZMHP20718 246 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 MDKP21741 143 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 GNB2P62879 340 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 DTD1Q8TEA8 209 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 FRZBQ92765 325 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 MAP1LC3BQ9GZQ8 125 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 CHODLQ9H9P2 273 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 WNK2Q9Y3S1 2297 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 UBE2L5PA0A1B0GUS4 154 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 A0A1B0GV90 55 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 DVL1O14640 695 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 RAB11AP62491 216 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 MRPS11P82912 194 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 H2BFWTQ7Z2G1 175 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 RPP25LQ8N5L8 163 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 OR10P1Q8NGE3 313 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 ABHD5Q8WTS1 349 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 PERPQ96FX8 193 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms