RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SPTBN4Q9H254 2564 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 PMS2P5A8MQ11 134 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 ZNF705FA8MVS1 300 aaPredicted RBP6.55□□□□□ -1.36
COL21A1-212ENST00000535941 GPR137BO60478 399 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 RAMP3O60896 148 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 C1QL1O75973 258 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 GYPAP02724 150 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 ZNF705DP0CH99 300 aaPredicted RBP6.55□□□□□ -1.36
COL21A1-212ENST00000535941 ZNF705BP0CI00 300 aaPredicted RBP6.55□□□□□ -1.36
COL21A1-212ENST00000535941 RPL12P30050 165 aaKnown RBP6.55□□□□□ -1.36
COL21A1-212ENST00000535941 PPP1CCP36873 323 aaKnown RBP6.55□□□□□ -1.36
COL21A1-212ENST00000535941 CT45A1Q5HYN5 189 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 CT45A3Q8NHU0 189 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 FAM213BQ8TBF2 198 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 OR2D2Q9H210 308 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 LPAR2Q9HBW0 351 aa6.55□□□□□ -1.36
COL21A1-212ENST00000535941 PPIAL4EA0A075B759 164 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 BORCS7-ASMTA0A0B4J1R7 106 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 IGHV1-69-2A0A0G2JMI3 117 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 LRRC30A6NM36 301 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 PPIAL4DF5H284 164 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 C19orf84I3L1E1 186 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 SPINT2O43291 252 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 MMP23AO75900 390 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 PPIAL4FP0DN26 164 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 GABRA2P47869 451 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 PTTG1IPP53801 180 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 CCL8P80075 99 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 LEMD1Q68G75 181 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 LYPD2Q6UXB3 125 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 TPRX1Q8N7U7 411 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 OR1L6Q8NGR2 347 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 GPHA2Q96T91 129 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 RAB9BQ9NP90 201 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 CISD1Q9NZ45 108 aaKnown RBP6.54□□□□□ -1.36
COL21A1-212ENST00000535941 PPIAL4AQ9Y536 164 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 KMT2BQ9UMN6 2715 aaPredicted RBP6.54□□□□□ -1.36
COL21A1-212ENST00000535941 ADAM20O43506 726 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 IFNA21P01568 189 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 PMS2P11Q13670 270 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 VWC2Q2TAL6 325 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 TMEM95Q3KNT9 176 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 TEX38Q6PEX7 206 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 ZNF429Q86V71 674 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 MUC15Q8N387 334 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 ACACAQ13085 2346 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 IGSF10Q6WRI0 2623 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 XKRY2A2RUG3 117 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 A6NJY4 79 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 RAB29O14966 203 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 SCGB1D2O95969 90 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 RAB7AP51149 207 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 TMEM33P57088 247 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 PAX2Q02962 417 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 TMEM200BQ69YZ2 307 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 LFNGQ8NES3 379 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 OR52E5Q8NH55 327 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 RNASEH2CQ8TDP1 164 aaKnown RBP6.54□□□□□ -1.36
COL21A1-212ENST00000535941 TMEM18Q96B42 140 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 YPEL4Q96NS1 127 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 CCL13Q99616 98 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 SPIN2AQ99865 258 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 RARRES2Q99969 163 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 SPIN2BQ9BPZ2 258 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 TLN1Q9Y490 2541 aaKnown RBP6.54□□□□□ -1.36
COL21A1-212ENST00000535941 IGF2RP11717 2491 aa6.54□□□□□ -1.36
COL21A1-212ENST00000535941 POLEQ07864 2286 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 CFAP46Q8IYW2 2715 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 IGSF23A1L1A6 192 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 PRSS46E5RG02 174 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 M0QZ24 198 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 IRF2P14316 349 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 GNLYP22749 145 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 KIR2DS2P43631 304 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 MRGPRG-AS1Q2M3A8 158 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 ZCCHC24Q8N2G6 241 aaKnown RBP6.53□□□□□ -1.36
COL21A1-212ENST00000535941 OR1P1Q8NH06 330 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 TVP23CQ96ET8 276 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 WSB1Q9Y6I7 421 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 NKX6-3A6NJ46 265 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 BAXQ07812 192 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 HAGHQ16775 308 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 PVRIGQ6DKI7 326 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 HAPLN4Q86UW8 402 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 SCRT1Q9BWW7 348 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 PLEKHF2Q9H8W4 249 aa6.53□□□□□ -1.36
COL21A1-212ENST00000535941 SLC25A10Q9UBX3 287 aaPredicted RBP6.53□□□□□ -1.36
COL21A1-212ENST00000535941 POLR3KQ9Y2Y1 108 aaPredicted RBP6.53□□□□□ -1.36
COL21A1-212ENST00000535941 LSM5Q9Y4Y9 91 aaKnown RBP6.53□□□□□ -1.36
COL21A1-212ENST00000535941 RBM7Q9Y580 266 aaKnown RBP6.53□□□□□ -1.36
COL21A1-212ENST00000535941 A0A087WWC5 75 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 INS-IGF2F8WCM5 200 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 LY6LH3BQJ8 138 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 ST8SIA3O43173 380 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 TNFSF12O43508 249 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 COL8A2P25067 703 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 TMEM14EPQ6UXP3 125 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 CENPVQ7Z7K6 275 aaPredicted RBP6.52□□□□□ -1.37
COL21A1-212ENST00000535941 ABHD14AQ9BUJ0 271 aa6.52□□□□□ -1.37
COL21A1-212ENST00000535941 PIEZO1Q92508 2521 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms