RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 TMEM68Q96MH6 324 aa9.35□□□□□ -0.91
CTSC-209ENST00000534131 ZNF430Q9H8G1 570 aaPredicted RBP9.35□□□□□ -0.91
CTSC-209ENST00000534131 PARP11Q9NR21 331 aa9.35□□□□□ -0.91
CTSC-209ENST00000534131 SHPKQ9UHJ6 478 aa9.35□□□□□ -0.91
CTSC-209ENST00000534131 RNF114Q9Y508 228 aa9.35□□□□□ -0.91
CTSC-209ENST00000534131 FBN3Q75N90 2809 aa9.35□□□□□ -0.91
CTSC-209ENST00000534131 IGHV7-81A0A0B4J1V7 117 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 IGKV1-39P01597 117 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 IGKV1D-39P04432 117 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 HLA-GP17693 338 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 RPL27AP46776 148 aaKnown RBP9.34□□□□□ -0.91
CTSC-209ENST00000534131 KRTAP24-1Q3LI83 254 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 LRTM2Q8N967 370 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 LINC01006Q8NI28 216 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 ZNF431Q8TF32 576 aaPredicted RBP9.34□□□□□ -0.91
CTSC-209ENST00000534131 SPIN2AQ99865 258 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 SPIN2BQ9BPZ2 258 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 HSPB9Q9BQS6 159 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 MARVELD1Q9BSK0 173 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 C19orf24Q9BVV8 132 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 TMED3Q9Y3Q3 217 aa9.34□□□□□ -0.91
CTSC-209ENST00000534131 TNCP24821 2201 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 SVEP1Q4LDE5 3571 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 PSMB11A5LHX3 300 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 FCN1O00602 326 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 PJVKQ0ZLH3 352 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 UNQ5815/PRO19632Q6UWF5 114 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 C12orf54Q6X4T0 127 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 STPG2Q8N412 459 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 C12orf45Q8N5I9 185 aaPredicted RBP9.33□□□□□ -0.92
CTSC-209ENST00000534131 SLC35G3Q8N808 338 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 MINDY2Q8NBR6 621 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 UXS1Q8NBZ7 420 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 OR1L8Q8NGR8 309 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 OR5B3Q8NH48 314 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 SGMS2Q8NHU3 365 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 GRPEL2Q8TAA5 225 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 SRSF12Q8WXF0 261 aaKnown RBP9.33□□□□□ -0.92
CTSC-209ENST00000534131 FYTTD1Q96QD9 318 aaKnown RBP9.33□□□□□ -0.92
CTSC-209ENST00000534131 TPSG1Q9NRR2 321 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.33□□□□□ -0.92
CTSC-209ENST00000534131 ZNF580Q9UK33 172 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 OR51B2Q9Y5P1 312 aa9.33□□□□□ -0.92
CTSC-209ENST00000534131 TRAV41A0A0B4J266 112 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 C15orf61A6NNL5 157 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 SNRPGP15A8MWD9 76 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 ATP6V0E1O15342 81 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 IFNA17P01571 189 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 IGKV1-5P01602 117 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 IGF1P05019 195 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 IL6RP08887 468 aaPredicted RBP9.32□□□□□ -0.92
CTSC-209ENST00000534131 HOXB5P09067 269 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 OR9G9P0C7N8 305 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 TRAPPC2P0DI81 140 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 TRAPPC2BP0DI82 140 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 SULT1A3P0DMM9 295 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 SULT1A4P0DMN0 295 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 MDKP21741 143 aaPredicted RBP9.32□□□□□ -0.92
CTSC-209ENST00000534131 COMPP49747 757 aaPredicted RBP9.32□□□□□ -0.92
CTSC-209ENST00000534131 ANKRD55Q3KP44 614 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 AKIRIN2Q53H80 203 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 Q6ZS46 218 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 LYZL2Q7Z4W2 148 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 HSD17B13Q7Z5P4 300 aaPredicted RBP9.32□□□□□ -0.92
CTSC-209ENST00000534131 COMMD1Q8N668 190 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 OR1S1Q8NH92 325 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 LHFPL5Q8TAF8 219 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 MITD1Q8WV92 249 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 GPR146Q96CH1 333 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 SEC22CQ9BRL7 303 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 ENY2Q9NPA8 101 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 PRR13Q9NZ81 148 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 NSG2Q9Y328 171 aa9.32□□□□□ -0.92
CTSC-209ENST00000534131 TRAV3A0A0B4J244 114 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 A0A1B0GU03 582 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 A0A1W2PN81 502 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 MSGN1A6NI15 193 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 CYB5BO43169 146 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 SLC25A6P12236 298 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 CHRNA7P36544 502 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 CRIP2P52943 208 aaPredicted RBP9.31□□□□□ -0.92
CTSC-209ENST00000534131 SMCO1Q147U7 214 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 ECSCRQ19T08 205 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 ZNF429Q86V71 674 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 KLHDC1Q8N7A1 406 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 LFNGQ8NES3 379 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 OR4X2Q8NGF9 303 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 OR52B4Q8NGK2 314 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 SRSF8Q9BRL6 282 aaKnown RBP9.31□□□□□ -0.92
CTSC-209ENST00000534131 FAM103A1Q9BTL3 118 aaKnown RBP9.31□□□□□ -0.92
CTSC-209ENST00000534131 HINT2Q9BX68 163 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 QTRT1Q9BXR0 403 aaKnown RBP9.31□□□□□ -0.92
CTSC-209ENST00000534131 SERTAD4Q9NUC0 356 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 LINC00527Q9UJ94 153 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 FOXA2Q9Y261 457 aaPredicted RBP9.31□□□□□ -0.92
CTSC-209ENST00000534131 ZNF257Q9Y2Q1 563 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 WSB1Q9Y6I7 421 aa9.31□□□□□ -0.92
CTSC-209ENST00000534131 TEX50A0A1B0GTY4 177 aa9.3□□□□□ -0.92
CTSC-209ENST00000534131 LINC01548A6NM66 108 aa9.3□□□□□ -0.92
CTSC-209ENST00000534131 OPN1MWP04001 364 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms