RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FYTTD1Q96QD9 318 aaKnown RBP6.75□□□□□ -1.33
COPB1-210ENST00000533533 RSRP1Q9BUV0 290 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 KLK15Q9H2R5 256 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 ZNF430Q9H8G1 570 aaPredicted RBP6.75□□□□□ -1.33
COPB1-210ENST00000533533 COA4Q9NYJ1 87 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 COPZ2Q9P299 210 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 C14orf166Q9Y224 244 aaKnown RBP6.75□□□□□ -1.33
COPB1-210ENST00000533533 NUBP2Q9Y5Y2 271 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 CSMD3Q7Z407 3707 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 SACSQ9NZJ4 4579 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 ANKRD20A5PA0PJZ0 165 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 RBFOX2O43251 390 aaKnown RBP eCLIP6.74□□□□□ -1.33
COPB1-210ENST00000533533 KBTBD11O94819 623 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 KRASP01116 189 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 TRGV3P03979 118 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 NQO2P16083 231 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 PSMB8P28062 276 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 PPIFP30405 207 aaKnown RBP6.74□□□□□ -1.33
COPB1-210ENST00000533533 FAUP35544 74 aaKnown RBP6.74□□□□□ -1.33
COPB1-210ENST00000533533 RAB9AP51151 201 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 UCP3P55916 312 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 PIGPP57054 158 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 TAS2R31P59538 309 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 AKIRIN2Q53H80 203 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 ZNF57Q68EA5 555 aaPredicted RBP6.74□□□□□ -1.33
COPB1-210ENST00000533533 OR4A47Q6IF82 309 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 CCDC190Q86UF4 302 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 TOMM5Q8N4H5 51 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 CCDC71LQ8N9Z2 235 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 OR51S1Q8NGJ8 323 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 OR6Q1Q8NGQ2 317 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 OR13C8Q8NGS7 320 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 ZFAND1Q8TCF1 268 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 SOSTQ9BQB4 213 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 PLEKHA2Q9HB19 425 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 SLC2A9Q9NRM0 540 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 ZNF580Q9UK33 172 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 SMAD5-AS1Q9Y6J3 95 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 V9GYH0 126 aa6.74□□□□□ -1.33
COPB1-210ENST00000533533 TEX13DA0A0J9YY54 714 aaPredicted RBP6.73□□□□□ -1.33
COPB1-210ENST00000533533 LINC00854A0A1B0GVQ3 168 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 HMX3A6NHT5 357 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 SOX15O60248 233 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 SNAPC5O75971 98 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 LY86O95711 162 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 IGLV1-40P01703 118 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 IGHV3-11P01762 117 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 SERPINE2P07093 398 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 ZNF735P0CB33 412 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 MYOD1P15172 320 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 HLA-GP17693 338 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 G6PCP35575 357 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 RPL27AP46776 148 aaKnown RBP6.73□□□□□ -1.33
COPB1-210ENST00000533533 INSL3P51460 131 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 CRIP2P52943 208 aaPredicted RBP6.73□□□□□ -1.33
COPB1-210ENST00000533533 AP3S2P59780 193 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 RPL8P62917 257 aaKnown RBP6.73□□□□□ -1.33
COPB1-210ENST00000533533 SSBP2P81877 361 aaPredicted RBP6.73□□□□□ -1.33
COPB1-210ENST00000533533 ZNF79Q15937 498 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 TRIM16LQ309B1 348 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 TRIQKQ629K1 86 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 LHFPL1Q86WI0 220 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 SBSPONQ8IVN8 264 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 PUSL1Q8N0Z8 303 aaKnown RBP6.73□□□□□ -1.33
COPB1-210ENST00000533533 MINDY2Q8NBR6 621 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 OR11H1Q8NG94 326 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 RNASE11Q8TAA1 199 aaKnown RBP6.73□□□□□ -1.33
COPB1-210ENST00000533533 TMEM167AQ8TBQ9 72 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 ZNF486Q96H40 463 aaPredicted RBP6.73□□□□□ -1.33
COPB1-210ENST00000533533 RCHY1Q96PM5 261 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 SPIN2AQ99865 258 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 PRRT1Q99946 306 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 SPIN2BQ9BPZ2 258 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 HINT2Q9BX68 163 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 COMMD5Q9GZQ3 224 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 GNB4Q9HAV0 340 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 TMEM140Q9NV12 185 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 COMMD9Q9P000 198 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 SCP2D1Q9UJQ7 156 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 VSIG4Q9Y279 399 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 LYSTQ99698 3801 aa6.73□□□□□ -1.33
COPB1-210ENST00000533533 EPPK1P58107 5090 aaKnown RBP6.72□□□□□ -1.33
COPB1-210ENST00000533533 TRAV3A0A0B4J244 114 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 C3orf85A0A1B0GTC6 90 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 C13orf42A0A1B0GVH6 325 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 MARCH11A6NNE9 402 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 UPK2O00526 184 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 RBMXL2O75526 392 aaKnown RBP6.72□□□□□ -1.33
COPB1-210ENST00000533533 PRH1P02810 166 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 CTSDP07339 412 aaPredicted RBP6.72□□□□□ -1.33
COPB1-210ENST00000533533 OR8U8P0C7N1 319 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 LYL1P12980 280 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 PTBP1P26599 531 aaKnown RBP eCLIP6.72□□□□□ -1.33
COPB1-210ENST00000533533 MAS1LP35410 378 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 DEFA5Q01523 94 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 MRGPRG-AS1Q2M3A8 158 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 SP6Q3SY56 376 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 ZNF585BQ52M93 769 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 C4orf48Q5BLP8 95 aa6.72□□□□□ -1.33
COPB1-210ENST00000533533 H2BFWTQ7Z2G1 175 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms