RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 EEF1AKMT3Q96AZ1 226 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 FANCD2OSQ96PS1 177 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 PLEKHA2Q9HB19 425 aa11.73□□□□□ -0.53
CPSF1-211ENST00000533492 IZUMO1RA6ND01 250 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 UPK2O00526 184 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 HLA-AP01891 365 aaKnown RBP11.72□□□□□ -0.53
CPSF1-211ENST00000533492 ARL3P36405 182 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 ERVK-16P61578 105 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 POU2AF1Q16633 256 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 CLEC19AQ6UXS0 136 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 CMTM1Q8IZ96 169 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 OR6F1Q8NGZ6 308 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 MUC7Q8TAX7 377 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 SLC25A46Q96AG3 418 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 TMEM140Q9NV12 185 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 COMMD3Q9UBI1 195 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 S4R3C0 116 aa11.72□□□□□ -0.53
CPSF1-211ENST00000533492 TRAV3A0A0B4J244 114 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 S1PR2O95136 353 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 RPA2P15927 270 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 MECP2P51608 486 aaKnown RBP11.71□□□□□ -0.53
CPSF1-211ENST00000533492 OR2B8PP59922 312 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 CD300EQ496F6 205 aaPredicted RBP11.71□□□□□ -0.53
CPSF1-211ENST00000533492 FAM106AQ4KMX7 169 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 GPHB5Q86YW7 130 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 MOB3AQ96BX8 217 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 CXorf58Q96LI9 332 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 TM2D3Q9BRN9 247 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 FUNDC2Q9BWH2 189 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 COMMD9Q9P000 198 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 THYN1Q9P016 225 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 DMRT1Q9Y5R6 373 aa11.71□□□□□ -0.53
CPSF1-211ENST00000533492 TRBV7-1A0A0A6YYK4 115 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 ZNF320A2RRD8 509 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 C2orf70A6NJV1 201 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 CGB1A6NKQ9 187 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 LGALS9O00182 355 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 CYB5BO43169 146 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 PGLYRP1O75594 196 aaPredicted RBP11.7□□□□□ -0.54
CPSF1-211ENST00000533492 RLN1P04808 185 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 FOLR2P14207 255 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 NAT1P18440 290 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 F2RP25116 425 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 HLA-DMAP28067 261 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 TSPAN5P62079 268 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 NCS1P62166 190 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 DEFB114Q30KQ6 69 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 CCDC140Q96MF4 163 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 SRSF8Q9BRL6 282 aaKnown RBP11.7□□□□□ -0.54
CPSF1-211ENST00000533492 THAP7Q9BT49 309 aaPredicted RBP11.7□□□□□ -0.54
CPSF1-211ENST00000533492 QTRT1Q9BXR0 403 aaKnown RBP11.7□□□□□ -0.54
CPSF1-211ENST00000533492 SLC2A8Q9NY64 477 aa11.7□□□□□ -0.54
CPSF1-211ENST00000533492 IGLV11-55A0A075B6I3 123 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 GPR31O00270 319 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 APOA1P02647 267 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 CLEC3BP05452 202 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 EIF4EP06730 217 aaKnown RBP11.69□□□□□ -0.54
CPSF1-211ENST00000533492 TRAPPC2P0DI81 140 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 TRAPPC2BP0DI82 140 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 S100GP29377 79 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 HRH1P35367 487 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 LPAR6P43657 344 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 CD81P60033 236 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 VBP1P61758 197 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 GUCA2BQ16661 112 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 KLK9Q2XQG4 91 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 THOC7Q6I9Y2 204 aaKnown RBP11.69□□□□□ -0.54
CPSF1-211ENST00000533492 ADAMTSL5Q6ZMM2 481 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 LAX1Q8IWV1 398 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 DGCR14Q96DF8 476 aaKnown RBP11.69□□□□□ -0.54
CPSF1-211ENST00000533492 CMTM3Q96MX0 182 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 SPATA25Q9BR10 227 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 TECRQ9NZ01 308 aaKnown RBP11.69□□□□□ -0.54
CPSF1-211ENST00000533492 KLK9Q9UKQ9 250 aa11.69□□□□□ -0.54
CPSF1-211ENST00000533492 KMT2CQ8NEZ4 4911 aaKnown RBP11.68□□□□□ -0.54
CPSF1-211ENST00000533492 IGLC7A0M8Q6 106 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 MARCH11A6NNE9 402 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 SNAPC5O75971 98 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 TPPPO94811 219 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 KRASP01116 189 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 FGF2P09038 288 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 LYL1P12980 280 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 CBLN1P23435 193 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 HAGHQ16775 308 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 LPCAT3Q6P1A2 487 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 SNX29P2Q8IUI4 249 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 LYSMD2Q8IV50 215 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 OR10W1Q8NGF6 305 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 GPX8Q8TED1 209 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 FCAMRQ8WWV6 532 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 CITED4Q96RK1 184 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 NEURL2Q9BR09 285 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 HINT2Q9BX68 163 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 SCPEP1Q9HB40 452 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 PALMDQ9NP74 551 aa11.68□□□□□ -0.54
CPSF1-211ENST00000533492 TEX50A0A1B0GTY4 177 aa11.67□□□□□ -0.54
CPSF1-211ENST00000533492 MFSD2BA6NFX1 497 aa11.67□□□□□ -0.54
CPSF1-211ENST00000533492 ZNF785A8K8V0 405 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms