RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MAS1LP35410 378 aa8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 UBE2MP61081 183 aaKnown RBP8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 RAP2BP61225 183 aa8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 SLC35B1P78383 322 aa8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 FCN2Q15485 313 aa8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 TNXAQ16473 311 aa8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 H2BFWTQ7Z2G1 175 aa8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 ARPC1AQ92747 370 aa8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 RRNAD1Q96FB5 475 aaKnown RBP8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 GALNT14Q96FL9 552 aa8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 NOL4LQ96MY1 436 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 ZNF747Q9BV97 191 aa8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 WSB1Q9Y6I7 421 aa8.86□□□□□ -0.99
TRAPPC4-211ENST00000533012 TRAV41A0A0B4J266 112 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 PSMB11A5LHX3 300 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 IGKV1-39P01597 117 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 IGKV1D-39P04432 117 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 HLA-GP17693 338 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 VAMP1P23763 118 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 AKR1C2P52895 323 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 RPL8P62917 257 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 SUPT4H1P63272 117 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 SRPXP78539 464 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 TMEM187Q14656 261 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 MRGPRG-AS1Q2M3A8 158 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 C4orf46Q504U0 113 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 ZNF329Q86UD4 541 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 LGI3Q8N145 548 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 OR5AU1Q8NGC0 362 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 SGMS2Q8NHU3 365 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 RNASE11Q8TAA1 199 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 RBPMSQ93062 196 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 SEC22AQ96IW7 307 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 TMEM56Q96MV1 263 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 FAM210AQ96ND0 272 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 FYTTD1Q96QD9 318 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 PHB2Q99623 299 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 ZNF436Q9C0F3 470 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 COMMD5Q9GZQ3 224 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 FKBP11Q9NYL4 201 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 ZNF580Q9UK33 172 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 TMEM56-RWDD3S4R434 201 aa8.85□□□□□ -0.99
TRAPPC4-211ENST00000533012 TRAV3A0A0B4J244 114 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 MSGN1A6NI15 193 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 SFT2D2O95562 160 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 FGF2P09038 288 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 EGR2P11161 476 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 ANXA7P20073 488 aaKnown RBP8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 NDPQ00604 133 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 FGL1Q08830 312 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 PPP1R1AQ13522 171 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 ECSCRQ19T08 205 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 AKIRIN2Q53H80 203 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 TMEM268Q5VZI3 342 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 UNQ5815/PRO19632Q6UWF5 114 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 SELENOHQ8IZQ5 122 aaKnown RBP8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 COMMD1Q8N668 190 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 LFNGQ8NES3 379 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 OR4A16Q8NH70 328 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 SPATA3Q8NHX4 192 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 ZNF431Q8TF32 576 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 WFDC12Q8WWY7 111 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 SRSF12Q8WXF0 261 aaKnown RBP8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 IL22RA2Q969J5 263 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 TMEM68Q96MH6 324 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 SPIN2AQ99865 258 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 SPIN2BQ9BPZ2 258 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 FAM103A1Q9BTL3 118 aaKnown RBP8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 MGAT4CQ9UBM8 478 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 PRNDQ9UKY0 176 aa8.84□□□□□ -0.99
TRAPPC4-211ENST00000533012 C9orf170A2RU37 121 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 G3V318 75 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 RBMXL2O75526 392 aaKnown RBP8.83□□□□□ -1
TRAPPC4-211ENST00000533012 OPN1MWP04001 364 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 OR4E1P0C645 316 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 OR9G9P0C7N8 305 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 OPN1MW2P0DN77 364 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 OPN1MW3P0DN78 364 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 RPL27AP46776 148 aaKnown RBP8.83□□□□□ -1
TRAPPC4-211ENST00000533012 CRIP2P52943 208 aaPredicted RBP8.83□□□□□ -1
TRAPPC4-211ENST00000533012 SSBP2P81877 361 aaPredicted RBP8.83□□□□□ -1
TRAPPC4-211ENST00000533012 TEX38Q6PEX7 206 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 SHISA2Q6UWI4 295 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 ZNF767PQ75MW2 155 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 FAM219AQ8IW50 185 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 OR11H7Q8NGC8 314 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 OR4X2Q8NGF9 303 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 WIPF2Q8TF74 440 aaPredicted RBP8.83□□□□□ -1
TRAPPC4-211ENST00000533012 CASTOR1Q8WTX7 329 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 PRR13Q9NZ81 148 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 NSG2Q9Y328 171 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 FBXO7Q9Y3I1 522 aa8.83□□□□□ -1
TRAPPC4-211ENST00000533012 A0A0B4J2A0 478 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 TEX50A0A1B0GTY4 177 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 FBXO24O75426 580 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 IGKV1-5P01602 117 aa8.82□□□□□ -1
TRAPPC4-211ENST00000533012 HLA-AP01891 365 aaKnown RBP8.82□□□□□ -1
TRAPPC4-211ENST00000533012 PPIFP30405 207 aaKnown RBP8.82□□□□□ -1
TRAPPC4-211ENST00000533012 NKX2-5P52952 324 aaPredicted RBP8.82□□□□□ -1
TRAPPC4-211ENST00000533012 KRTAP10-3P60369 221 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms