RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 OR10G9Q8NGN4 311 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 OR10G7Q8NGN6 311 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 OR1L8Q8NGR8 309 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 TMEM167AQ8TBQ9 72 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 HARBI1Q96MB7 349 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 CHODLQ9H9P2 273 aa12.03□□□□□ -0.48
ECHDC1-220ENST00000528402 BOD1L1Q8NFC6 3051 aa12.02□□□□□ -0.48
ECHDC1-220ENST00000528402 PKDREJQ9NTG1 2253 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 TEX50A0A1B0GTY4 177 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 LOC102723971A0A1B0GUV8 181 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 MED19A0JLT2 244 aaPredicted RBP12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 MAP1LC3B2A6NCE7 125 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 SRRM4A7MD48 611 aaKnown RBP12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 IGKV1-16P04430 117 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 LIPFP07098 398 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 SRP19P09132 144 aaKnown RBP12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 SAA1P0DJI8 122 aaPredicted RBP12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 ERVFRD-1P60508 538 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 RPS16P62249 146 aaKnown RBP12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 VMA21Q3ZAQ7 101 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 C2orf83Q53S99 150 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 FFAR4Q5NUL3 377 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 TET2Q6N021 2002 aaPredicted RBP12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 MRPL41Q8IXM3 137 aaKnown RBP12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 ITLN2Q8WWU7 325 aaPredicted RBP12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 SPENQ96T58 3664 aaKnown RBP12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 RNF5Q99942 180 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 CLEC7AQ9BXN2 247 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 COMMD5Q9GZQ3 224 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 MAP1LC3BQ9GZQ8 125 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 TUBA4BQ9H853 241 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 SMCO4Q9NRQ5 59 aa12.02□□□□□ -0.49
ECHDC1-220ENST00000528402 IGHV2-26A0A0B4J1V2 119 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 RRHO14718 337 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 BCL2P10415 239 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 NPBWR1P48145 328 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 ELLP55199 621 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 RPL8P62917 257 aaKnown RBP12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 ERHP84090 104 aaKnown RBP12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 ICAM4Q14773 271 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 RHEBQ15382 184 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 HAGHQ16775 308 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 C17orf50Q8WW18 174 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 RARRES2Q99969 163 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 VSIRQ9H7M9 311 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 PATZ1Q9HBE1 687 aaKnown RBP12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 VAX2Q9UIW0 290 aa12.01□□□□□ -0.49
ECHDC1-220ENST00000528402 ANKHD1Q8IWZ3 2542 aaKnown RBP12□□□□□ -0.49
ECHDC1-220ENST00000528402 A0A1B0GV50 99 aa12□□□□□ -0.49
ECHDC1-220ENST00000528402 LYNX1G3V0Z9 82 aa12□□□□□ -0.49
ECHDC1-220ENST00000528402 IGLV1-47P01700 117 aa12□□□□□ -0.49
ECHDC1-220ENST00000528402 LYNX1P0DP58 116 aa12□□□□□ -0.49
ECHDC1-220ENST00000528402 ZNF726P1Q15940 193 aa12□□□□□ -0.49
ECHDC1-220ENST00000528402 HLA-DRB5Q30154 266 aa12□□□□□ -0.49
ECHDC1-220ENST00000528402 ACSM6Q6P461 480 aa12□□□□□ -0.49
ECHDC1-220ENST00000528402 LCN15Q6UWW0 184 aa12□□□□□ -0.49
ECHDC1-220ENST00000528402 TREML4Q6UXN2 200 aa12□□□□□ -0.49
ECHDC1-220ENST00000528402 RPP25LQ8N5L8 163 aaKnown RBP12□□□□□ -0.49
ECHDC1-220ENST00000528402 TEX45Q8NA69 505 aa12□□□□□ -0.49
ECHDC1-220ENST00000528402 ATMQ13315 3056 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 DCHS1Q96JQ0 3298 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 FAM74A7A6NL05 159 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 SEC14L6B5MCN3 397 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 M0R1W7 72 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 CA2P00918 260 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 PAX6P26367 422 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 SUB1P53999 127 aaKnown RBP eCLIP11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 BSXQ3C1V8 233 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 FAM74A3Q4VXF1 159 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 C1orf122Q6ZSJ8 110 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 RXFP4Q8TDU9 374 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 CACNG8Q8WXS5 425 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 MANBALQ9NQG1 85 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 NDUFA4L2Q9NRX3 87 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 GNG13Q9P2W3 67 aa11.99□□□□□ -0.49
ECHDC1-220ENST00000528402 LAMA5O15230 3695 aa11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 SMCO3A2RU48 225 aa11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 BUB1B-PAK6H3BSN5 160 aa11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 TSPAN9O75954 239 aa11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 F12P00748 615 aaPredicted RBP11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 SOD3P08294 240 aa11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 OR13C7P0DN81 318 aa11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 MAS1LP35410 378 aa11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 GPX4P36969 197 aaPredicted RBP11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 PSMB3P49720 205 aa11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 AVPI1Q5T686 147 aa11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 ZNRD1Q9P1U0 126 aa11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 LSM4Q9Y4Z0 139 aaKnown RBP11.98□□□□□ -0.49
ECHDC1-220ENST00000528402 A0A1W2PPV4 95 aa11.97□□□□□ -0.49
ECHDC1-220ENST00000528402 B4DEV8 164 aa11.97□□□□□ -0.49
ECHDC1-220ENST00000528402 M0R036 132 aa11.97□□□□□ -0.49
ECHDC1-220ENST00000528402 GNLYP22749 145 aa11.97□□□□□ -0.49
ECHDC1-220ENST00000528402 RPL29P47914 159 aaKnown RBP11.97□□□□□ -0.49
ECHDC1-220ENST00000528402 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
ECHDC1-220ENST00000528402 TMEM144Q7Z5S9 345 aa11.97□□□□□ -0.49
ECHDC1-220ENST00000528402 SLC35E3Q7Z769 313 aa11.97□□□□□ -0.49
ECHDC1-220ENST00000528402 C15orf54Q8N8G6 183 aa11.97□□□□□ -0.49
ECHDC1-220ENST00000528402 TMEM170AQ8WVE7 144 aa11.97□□□□□ -0.49
ECHDC1-220ENST00000528402 TXNDC17Q9BRA2 123 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms