RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 LCN12Q6JVE5 192 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 CGB2Q6NT52 195 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 TMEM179BQ7Z7N9 219 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 OR2T4Q8NH00 348 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 OR4S2Q8NH73 311 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 OR10G6Q8NH81 332 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 GNPDA2Q8TDQ7 276 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 GEMIN6Q8WXD5 167 aaKnown RBP3.46□□□□□ -1.86
CD44-220ENST00000525688 GALMQ96C23 342 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 SMIM8Q96KF7 97 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 OR5M11Q96RB7 305 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 GABARAPL3Q9BY60 117 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 DEFB127Q9H1M4 99 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 ACER3Q9NUN7 267 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 RFNGQ9Y644 331 aa3.46□□□□□ -1.86
CD44-220ENST00000525688 ASCC3Q8N3C0 2202 aaKnown RBP3.46□□□□□ -1.86
CD44-220ENST00000525688 DSPP15924 2871 aaKnown RBP3.45□□□□□ -1.86
CD44-220ENST00000525688 NBEAQ8NFP9 2946 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 hCG_1818297A0A087WSY0 165 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 BORCS7-ASMTA0A0B4J1R7 106 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 A0A0G2JN53 185 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 WI2-2373I1.2A0A1W2PRP0 233 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 C5orf49A4QMS7 147 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 OR5H14A6NHG9 310 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 ZNF850A8MQ14 1090 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 H3BP45 60 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 COPEO14579 308 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 FFAR1O14842 300 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 LYPLA1O75608 230 aaPredicted RBP3.45□□□□□ -1.86
CD44-220ENST00000525688 APOA2P02652 100 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 FGF6P10767 208 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 CSRP1P21291 193 aaKnown RBP3.45□□□□□ -1.86
CD44-220ENST00000525688 ZBTB25P24278 435 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 IL2RGP31785 369 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 P2RX1P51575 399 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 SLC18A1P54219 525 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 TAS2R46P59540 309 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 MAXP61244 160 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 ZNF616Q08AN1 781 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 C16orf72Q14CZ0 275 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 HERPUD1Q15011 391 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 GRK1Q15835 563 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 MESTQ5EB52 335 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 FA2HQ7L5A8 372 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 C20orf196Q8IYI0 205 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 NKAPP1Q8N9T2 125 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 GTSF1Q8WW33 167 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 REEP6Q96HR9 211 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 CNBD2Q96M20 576 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 CCDC115Q96NT0 180 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 SPACA5Q96QH8 159 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 KLF6Q99612 283 aaPredicted RBP3.45□□□□□ -1.86
CD44-220ENST00000525688 SFXN3Q9BWM7 321 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 TMEM126AQ9H061 195 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 EDA2RQ9HAV5 297 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 MMP26Q9NRE1 261 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 UQCC1Q9NVA1 299 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 SSR3Q9UNL2 185 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 SLC25A15Q9Y619 301 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 DOCK9Q9BZ29 2069 aa3.45□□□□□ -1.86
CD44-220ENST00000525688 LRRK1Q38SD2 2015 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 PCNX2A6NKB5 2137 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 CELSR3Q9NYQ7 3312 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 YLPM1P49750 1951 aaKnown RBP3.44□□□□□ -1.86
CD44-220ENST00000525688 PLXNA2O75051 1894 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 SPTY2D1-AS1A0A0U1RR47 76 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 INMT-MINDY4F8WBC2 141 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 H7C1C5 153 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 APOC4-APOC2K7ER74 178 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 ZNF207O43670 478 aaKnown RBP3.44□□□□□ -1.86
CD44-220ENST00000525688 APOC2P02655 101 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 HLA-DQB2P05538 268 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 CRYBA1P05813 215 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 MPC1LP0DKB6 136 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 RAB3AP20336 220 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 NCBP2P52298 156 aaKnown RBP eCLIP3.44□□□□□ -1.86
CD44-220ENST00000525688 ZNF138P52744 262 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 KRTAP10-9P60411 292 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 RPL26P61254 145 aaKnown RBP3.44□□□□□ -1.86
CD44-220ENST00000525688 LCN6P62502 163 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 RPS28P62857 69 aaKnown RBP3.44□□□□□ -1.86
CD44-220ENST00000525688 DYNLT1P63172 113 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 HLA-DRB3P79483 266 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 EMX2Q04743 252 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 IL15RAQ13261 267 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 KIAA0087Q14695 138 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 JOSD1Q15040 202 aaPredicted RBP3.44□□□□□ -1.86
CD44-220ENST00000525688 RGNQ15493 299 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 OR8B8Q15620 311 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 RNF212Q495C1 297 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 CENPWQ5EE01 88 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 FAM222AQ5U5X8 452 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 LCN8Q6JVE9 175 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 AGTRAPQ6RW13 159 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 Q6ZSR6 202 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 LINC00173Q6ZV60 143 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 VN1R4Q7Z5H5 301 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 LINC00337Q8N6G1 96 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 KLHL30-AS1Q8NEE0 82 aa3.44□□□□□ -1.86
CD44-220ENST00000525688 OR8B12Q8NGG6 310 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms