RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 FER1L5A0AVI2 2057 aa7.56□□□□□ -1.2
CSMD1-212ENST00000523387 WNT9BO14905 357 aa7.56□□□□□ -1.2
CSMD1-212ENST00000523387 NUDT3O95989 172 aa7.56□□□□□ -1.2
CSMD1-212ENST00000523387 ZNF295-AS1Q8N0V1 137 aa7.56□□□□□ -1.2
CSMD1-212ENST00000523387 RAB9BQ9NP90 201 aa7.56□□□□□ -1.2
CSMD1-212ENST00000523387 YTHDF2Q9Y5A9 579 aaKnown RBP7.56□□□□□ -1.2
CSMD1-212ENST00000523387 TRBV6-6A0A0A6YYG2 114 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 CA1P00915 261 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-212ENST00000523387 IGLC2P0DOY2 106 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 IGLC3P0DOY3 106 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 TSPOP30536 169 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 PRRX1P54821 245 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 LGALS4P56470 323 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 TMEM164Q5U3C3 297 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 SPATA31B1PQ5VZV4 182 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 TREML4Q6UXN2 200 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 MIR17HGQ75NE6 70 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 LYG1Q8N1E2 194 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 GGTLC1Q9BX51 225 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 UBE2ZQ9H832 354 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-212ENST00000523387 ZNF355PQ9NSJ1 428 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 TMEM131Q92545 1883 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 LINC00869P0C866 280 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 ZNF137PP52743 207 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 GABRA6Q16445 453 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 HES3Q5TGS1 186 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 TMEM144Q7Z5S9 345 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 DNASE2BQ8WZ79 361 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 TMEM140Q9NV12 185 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 TRAV9-2A0A087WT02 112 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 C15orf62A8K5M9 175 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 LYZL6O75951 148 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 CA2P00918 260 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 MAGEA5P43359 124 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 LHX2P50458 406 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 SELENOTP62341 195 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 Q0VG73 95 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 ALKBH6Q3KRA9 238 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 OR10J3Q5JRS4 329 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 SLC25A34Q6PIV7 304 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 VHLLQ6RSH7 139 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 SSX8Q7RTT4 187 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 LRRC29Q8WV35 223 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 IMMP1LQ96LU5 166 aa7.55□□□□□ -1.2
CSMD1-212ENST00000523387 TFF1P04155 84 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 OR9G9P0C7N8 305 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 IGFBP2P18065 325 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 GPR6P46095 362 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-212ENST00000523387 FOXA3P55318 350 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-212ENST00000523387 EFNB3Q15768 340 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 MRPL14Q6P1L8 145 aaKnown RBP7.54□□□□□ -1.2
CSMD1-212ENST00000523387 RNASE8Q8TDE3 154 aaKnown RBP7.54□□□□□ -1.2
CSMD1-212ENST00000523387 NABP2Q9BQ15 211 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 COMMD5Q9GZQ3 224 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 COX11Q9Y6N1 276 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 OR4C46A6NHA9 309 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 SLC25A5P05141 298 aaKnown RBP7.54□□□□□ -1.2
CSMD1-212ENST00000523387 ADH4P08319 380 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 PAX1P15863 534 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 GFRA1P56159 465 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 MZT1Q08AG7 82 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 RNPS1Q15287 305 aaKnown RBP7.54□□□□□ -1.2
CSMD1-212ENST00000523387 FAM53AQ6NSI3 398 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-212ENST00000523387 GGNQ86UU5 652 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 TMEM251Q8N6I4 163 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 DEFB108BQ8NET1 73 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 BLNKQ8WV28 456 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 RAB1CQ92928 201 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 DCTN5Q9BTE1 182 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 SEPSECSQ9HD40 501 aaKnown RBP7.54□□□□□ -1.2
CSMD1-212ENST00000523387 CDC42EP3Q9UKI2 254 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 C5orf42Q9H799 3197 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 A0A1W2PS18 150 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 C12orf54Q6X4T0 127 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 OR8B3Q8NGG8 313 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 TMEM70Q9BUB7 260 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 PHF7Q9BWX1 381 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-212ENST00000523387 CHODLQ9H9P2 273 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 SSUH2Q9Y2M2 353 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 LOXL2Q9Y4K0 774 aa7.54□□□□□ -1.2
CSMD1-212ENST00000523387 ISLRO14498 428 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 FOXH1O75593 365 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 SMRP1Q8NCR6 262 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 SGK494Q96LW2 274 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 MGST2Q99735 147 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 ZNF835Q9Y2P0 537 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 FREM1Q5H8C1 2179 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 LAMA3Q16787 3333 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 NKX6-3A6NJ46 265 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 NPIPB11E5RHQ5 1161 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 CCL25O15444 150 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 SMPD2O60906 423 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 LEPROTL1O95214 131 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 HIST1H1EP10412 219 aaKnown RBP7.53□□□□□ -1.2
CSMD1-212ENST00000523387 GATA2P23769 480 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-212ENST00000523387 ZNF83P51522 516 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 BPIFB3P59826 476 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 RTL8BQ17RB0 113 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 PRR31Q5SQ13 230 aa7.53□□□□□ -1.2
CSMD1-212ENST00000523387 Q6P435 159 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms