RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 OR4F5Q8NH21 305 aa6.59□□□□□ -1.35
VPS13B-210ENST00000521932 VSTM2AQ8TAG5 236 aa6.59□□□□□ -1.35
VPS13B-210ENST00000521932 ALX4Q9H161 411 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-210ENST00000521932 FBXL15Q9H469 300 aa6.59□□□□□ -1.35
VPS13B-210ENST00000521932 NAA60Q9H7X0 242 aa6.59□□□□□ -1.35
VPS13B-210ENST00000521932 PALMDQ9NP74 551 aa6.59□□□□□ -1.35
VPS13B-210ENST00000521932 SERTAD4Q9NUC0 356 aa6.59□□□□□ -1.35
VPS13B-210ENST00000521932 KCNIP3Q9Y2W7 256 aa6.59□□□□□ -1.35
VPS13B-210ENST00000521932 IGHV7-81A0A0B4J1V7 117 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 FAM240BA0A1B0GVZ2 78 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 CLPSL1A2RUU4 121 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 LINC01548A6NM66 108 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 MARCH11A6NNE9 402 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 OR2A4O95047 310 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 S1PR2O95136 353 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 SERPINE2P07093 398 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 OR5AC1P0C628 307 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 SAA1P0DJI8 122 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-210ENST00000521932 AKR1C4P17516 323 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 DEFA1P59665 94 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 DEFA3P59666 94 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 UBE2MP61081 183 aaKnown RBP6.58□□□□□ -1.36
VPS13B-210ENST00000521932 CX3CL1P78423 397 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 SSBP2P81877 361 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-210ENST00000521932 SP6Q3SY56 376 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 VKORC1L1Q8N0U8 176 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 CENPSQ8N2Z9 138 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 OR4A5Q8NH83 315 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 OR2T6Q8NHC8 308 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 SEC22AQ96IW7 307 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 TMEM56Q96MV1 263 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 OR2A7Q96R45 310 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 HSPB9Q9BQS6 159 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 C19orf24Q9BVV8 132 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 TMEM222Q9H0R3 208 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 BEX1Q9HBH7 125 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 BET1LQ9NYM9 111 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 ZNF580Q9UK33 172 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 FLVCR2Q9UPI3 526 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 TMEM56-RWDD3S4R434 201 aa6.58□□□□□ -1.36
VPS13B-210ENST00000521932 SH2D7A6NKC9 451 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-210ENST00000521932 KCNAB3O43448 404 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 KBTBD11O94819 623 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 KRASP01116 189 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 OR4E1P0C645 316 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 ANXA3P12429 323 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 MDKP21741 143 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-210ENST00000521932 G6PCP35575 357 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 CRIP2P52943 208 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-210ENST00000521932 PROK1P58294 105 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 PJVKQ0ZLH3 352 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 TMEM187Q14656 261 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 PLGLAQ15195 96 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 PRSS8Q16651 343 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 OR4A47Q6IF82 309 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 NRARPQ7Z6K4 114 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 SLC35E3Q7Z769 313 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 TMED4Q7Z7H5 227 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 DMBX1Q8NFW5 382 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 TMEM167AQ8TBQ9 72 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 WIPF2Q8TF74 440 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-210ENST00000521932 IL22RA2Q969J5 263 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 R3HDM4Q96D70 268 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 C20orf85Q9H1P6 137 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 OR51J1Q9H342 316 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 ZNF430Q9H8G1 570 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-210ENST00000521932 NUBP2Q9Y5Y2 271 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 C2CD3Q4AC94 2353 aa6.57□□□□□ -1.36
VPS13B-210ENST00000521932 PIGBOS1A0A0B4J2F0 54 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 C9orf170A2RU37 121 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 AP4M1O00189 453 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 UPK2O00526 184 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 ARPC1BO15143 372 aaKnown RBP6.56□□□□□ -1.36
VPS13B-210ENST00000521932 CREBL2O60519 120 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-210ENST00000521932 ATG12O94817 140 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 SFT2D2O95562 160 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 CA2P00918 260 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 P0C879 139 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 EGR2P11161 476 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-210ENST00000521932 MAS1LP35410 378 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 ERVK-16P61578 105 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 RPL8P62917 257 aaKnown RBP6.56□□□□□ -1.36
VPS13B-210ENST00000521932 PPP1R1AQ13522 171 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 FXYD3Q14802 87 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 AKIRIN2Q53H80 203 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 AWAT1Q58HT5 328 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 C9orf152Q5JTZ5 239 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 SSX9Q7RTT3 188 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 FOXRED2Q8IWF2 684 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 MMD2Q8IY49 270 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 SELENOHQ8IZQ5 122 aaKnown RBP6.56□□□□□ -1.36
VPS13B-210ENST00000521932 LRTM2Q8N967 370 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 SGMS2Q8NHU3 365 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 LHFPL5Q8TAF8 219 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 RBPMSQ93062 196 aaKnown RBP6.56□□□□□ -1.36
VPS13B-210ENST00000521932 CLCC1Q96S66 551 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 TMEM140Q9NV12 185 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 NUDT15Q9NV35 164 aa6.56□□□□□ -1.36
VPS13B-210ENST00000521932 TRAV6A0A075B6T7 132 aa6.55□□□□□ -1.36
VPS13B-210ENST00000521932 TRAV3A0A0B4J244 114 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms