RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 CFHR4Q92496 578 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 PINX1Q96BK5 328 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 GINS3Q9BRX5 216 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 WFDC1Q9HC57 220 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 HILPDAQ9Y5L2 63 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 CHD6Q8TD26 2715 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 TEX50A0A1B0GTY4 177 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 INS-IGF2F8WCM5 200 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 SLC25A17O43808 307 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 MOSP00540 346 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 IFNA10P01566 189 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 SEC11BP0C7V7 166 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 PSG5Q15238 335 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 SSX2Q16385 188 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 LDLRAD2Q5SZI1 272 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 LINC01356Q8N9X3 169 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 OR10P1Q8NGE3 313 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 OR2T10Q8NGZ9 312 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 OR4C12Q96R67 309 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 AUP1Q9Y679 476 aa12.12□□□□□ -0.47
TRAPPC9-205ENST00000518839 DOPEY2Q9Y3R5 2298 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 A0A096LNT2 108 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 RPS10-NUDT3A0A1W2PQS6 291 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 A0A1W2PRD5 423 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 A0A1W2PRF3 423 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 A0A1W2PRM7 423 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 NPFFO15130 113 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 CRYGBP07316 175 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 OR8U8P0C7N1 319 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 BRS3P32247 399 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 SLC38A11Q08AI6 406 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 SPINK9Q5DT21 86 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 Q5PR19 223 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 PDZD9Q8IXQ8 264 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 RNF141Q8WVD5 230 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 GNPNAT1Q96EK6 184 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 PARD6GQ9BYG4 376 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 ZNF430Q9H8G1 570 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
TRAPPC9-205ENST00000518839 CENPVL3A0A0U1RRI6 287 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 C15orf62A8K5M9 175 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 J3QLI3 93 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 ACTL6BO94805 426 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 SAA4P35542 130 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 ERHP84090 104 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 EBI3Q14213 229 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 PRSS8Q16651 343 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 OR8G2PQ6IF36 304 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 SLC25A24Q6NUK1 477 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 THNSL2Q86YJ6 484 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 SLC24A4Q8NFF2 622 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 SCGB1C1Q8TD33 95 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 TMED6Q8WW62 240 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 TMEM147Q9BVK8 224 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 HINT2Q9BX68 163 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 NDUFA4L2Q9NRX3 87 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 METTL1Q9UBP6 276 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 SIGLEC9Q9Y336 463 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 ABCA2Q9BZC7 2435 aa12.1□□□□□ -0.47
TRAPPC9-205ENST00000518839 SPG11Q96JI7 2443 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 USP9YO00507 2555 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 IGHV1-69DA0A0B4J2H0 117 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 LINC00862A6NCI5 91 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 PMS2P5A8MQ11 134 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 RRHO14718 337 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 NBR2O15453 112 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 IGKV1D-33P01593 117 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 IGKV1-33P01594 117 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 IGHV1-69P01742 117 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 NMBP08949 121 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 SPP1P10451 314 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 NPY1RP25929 384 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 RAB5CP51148 216 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 HAPLN4Q86UW8 402 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 PPP1R27Q86WC6 154 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 NPBQ8NG41 125 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 EAF1Q96JC9 268 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 C7orf69Q9H7B7 122 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 HIF1ANQ9NWT6 349 aa12.09□□□□□ -0.47
TRAPPC9-205ENST00000518839 DCHS2Q6V1P9 2916 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 FBXO24O75426 580 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 NDUFA3O95167 84 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 SNRNP70P08621 437 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 FAM106CPP0CH98 169 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 RPL27AP46776 148 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 SULT1A2P50226 295 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 SUB1P53999 127 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 ARL16Q0P5N6 197 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 HES1Q14469 280 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 PLGLAQ15195 96 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 MMDQ15546 238 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 C2orf83Q53S99 150 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 ETV3LQ6ZN32 361 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 HSD17B13Q7Z5P4 300 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 HSD17B11Q8NBQ5 300 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 SAT2Q96F10 170 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 RITA1Q96K30 269 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 REG4Q9BYZ8 158 aa12.08□□□□□ -0.48
TRAPPC9-205ENST00000518839 UQCC1Q9NVA1 299 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms