RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 SFXN3Q9BWM7 321 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 TRAV9-1A0A075B6T8 112 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 A0A1W2PS18 150 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 NTN3O00634 580 aaPredicted RBP10.24□□□□□ -0.77
PCM1-203ENST00000517545 GFRA3O60609 400 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 HYPMO75409 117 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 VDAC2P45880 294 aaPredicted RBP10.24□□□□□ -0.77
PCM1-203ENST00000517545 ZNF83P51522 516 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 ASPHD1Q5U4P2 390 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 SLC35E4Q6ICL7 350 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 ATOH7Q8N100 152 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 FAM19A2Q8N3H0 131 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 OR4P4Q8NGL7 312 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 SLC25A40Q8TBP6 338 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 GMPPAQ96IJ6 420 aaPredicted RBP10.24□□□□□ -0.77
PCM1-203ENST00000517545 HSD17B10Q99714 261 aaKnown RBP10.24□□□□□ -0.77
PCM1-203ENST00000517545 CHODLQ9H9P2 273 aa10.24□□□□□ -0.77
PCM1-203ENST00000517545 A8MXE2 369 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 AHRRA9YTQ3 701 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 ACTL6BO94805 426 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 CENPWQ5EE01 88 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 FBXW9Q5XUX1 488 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 TIPARPQ7Z3E1 657 aaKnown RBP10.23□□□□□ -0.77
PCM1-203ENST00000517545 STPG3Q8N7X2 389 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 OR4A16Q8NH70 328 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 FAM173AQ9BQD7 235 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 TTTY12Q9BZ98 90 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 SLC45A2Q9UMX9 530 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 TET2Q6N021 2002 aaPredicted RBP10.23□□□□□ -0.77
PCM1-203ENST00000517545 KMT2EQ8IZD2 1858 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 DUTP33316 252 aaKnown RBP10.23□□□□□ -0.77
PCM1-203ENST00000517545 TBC1D28Q2M2D7 210 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 MAJINQ3KP22 176 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 Q6ZN92 141 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 TXN2Q99757 166 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 GNB1LQ9BYB4 327 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 OBP2BQ9NPH6 170 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 TRGV10A0A0A0MS01 117 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 PATE3B3GLJ2 98 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 IGLC2P0DOY2 106 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 IGLC3P0DOY3 106 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 MPV17P39210 176 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 DCAF12Q5T6F0 453 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 PQLC2Q6ZP29 291 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 C11orf53Q8IXP5 236 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 CT55Q8WUE5 264 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 C11orf52Q96A22 123 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 HES4Q9HCC6 221 aa10.23□□□□□ -0.77
PCM1-203ENST00000517545 LSM4Q9Y4Z0 139 aaKnown RBP10.23□□□□□ -0.77
PCM1-203ENST00000517545 C9JCJ5 164 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 OR5G3P0C626 314 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 TDGF1P13385 188 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 CRYBB3P26998 211 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 EDDM3AQ14507 147 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 TMEM136Q6ZRR5 245 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 TMEM251Q8N6I4 163 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 KCNS1Q96KK3 526 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 DSPP15924 2871 aaKnown RBP10.22□□□□□ -0.77
PCM1-203ENST00000517545 ZNF253O75346 499 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 C3orf79P0CE67 100 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 SRIP30626 198 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 RPL39P5Q59GN2 51 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 MRPL54Q6P161 138 aaKnown RBP10.22□□□□□ -0.77
PCM1-203ENST00000517545 MIR17HGQ75NE6 70 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 TCTEX1D1Q8N7M0 179 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 ZFHX4Q86UP3 3567 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 PTPRBP23467 1997 aa10.22□□□□□ -0.77
PCM1-203ENST00000517545 GPR12P47775 334 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 FAM122AQ96E09 287 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 TUBG2Q9NRH3 451 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 B4GALT7Q9UBV7 327 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 UQCR10Q9UDW1 63 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 BMPR1BO00238 502 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 CCL25O15444 150 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 GNG4P50150 75 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 TMPRSS3P57727 454 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 CX3CL1P78423 397 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 LCN12Q6JVE5 192 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 NIT1Q86X76 327 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 SPOCK3Q9BQ16 436 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 LAMTOR2Q9Y2Q5 125 aa10.21□□□□□ -0.77
PCM1-203ENST00000517545 M0R1X1 148 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 SP1P08047 785 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 NTF3P20783 257 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 HNRNPA3P51991 378 aaKnown RBP10.21□□□□□ -0.78
PCM1-203ENST00000517545 RHOBP62745 196 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 RPP30P78346 268 aaKnown RBP10.21□□□□□ -0.78
PCM1-203ENST00000517545 RELBQ01201 579 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 AARDQ4LEZ3 155 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 ACP7Q6ZNF0 438 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 LINC00696Q6ZRV3 163 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 WDR31Q8NA23 367 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 RNASE8Q8TDE3 154 aaKnown RBP10.21□□□□□ -0.78
PCM1-203ENST00000517545 NPVFQ9HCQ7 196 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 PILRBQ9UKJ0 227 aa10.21□□□□□ -0.78
PCM1-203ENST00000517545 HELTA6NFD8 242 aa10.2□□□□□ -0.78
PCM1-203ENST00000517545 ZNF324O75467 553 aaPredicted RBP10.2□□□□□ -0.78
PCM1-203ENST00000517545 CA1P00915 261 aaPredicted RBP10.2□□□□□ -0.78
PCM1-203ENST00000517545 IGFBP2P18065 325 aa10.2□□□□□ -0.78
PCM1-203ENST00000517545 FZR1Q9UM11 496 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms