RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 DEFB113Q30KQ7 82 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 OR8G2PQ6IF36 304 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 ZNF429Q86V71 674 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 OR10W1Q8NGF6 305 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 STOML3Q8TAV4 291 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 AJUBAQ96IF1 538 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 CLCC1Q96S66 551 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 HEYLQ9NQ87 328 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-213ENST00000515418 PLA2G2EQ9NZK7 142 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 NOTCH2Q04721 2471 aa7.36□□□□□ -1.23
CPNE4-213ENST00000515418 CENPVL3A0A0U1RRI6 287 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 RPS10-NUDT3A0A1W2PQS6 291 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 JTBO76095 146 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 TPT1P13693 172 aaKnown RBP7.35□□□□□ -1.23
CPNE4-213ENST00000515418 VDAC2P45880 294 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-213ENST00000515418 UBE2E1P51965 193 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 F2RL1P55085 397 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 MRGPRG-AS1Q2M3A8 158 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 STX12Q86Y82 276 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 HSD17B11Q8NBQ5 300 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 AIFM2Q9BRQ8 373 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 SH3BGRL3Q9H299 93 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 ZNF430Q9H8G1 570 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-213ENST00000515418 BET1LQ9NYM9 111 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 FOXA2Q9Y261 457 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-213ENST00000515418 MXRA5Q9NR99 2828 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 RNF223E7ERA6 249 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 RRHO14718 337 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 VENTXO95231 258 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 IFNA10P01566 189 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 MSMBP08118 114 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 SAA4P35542 130 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 CEACAM3P40198 252 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 LGALS7P47929 136 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 ARHGDIBP52566 201 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 RPL8P62917 257 aaKnown RBP7.35□□□□□ -1.23
CPNE4-213ENST00000515418 PSG5Q15238 335 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 C10orf55Q5SWW7 151 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 TMEM14EPQ6UXP3 125 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 UBAC2Q8NBM4 344 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 OR1S2Q8NGQ3 325 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 OR52E5Q8NH55 327 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 TMEM170AQ8WVE7 144 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 CFHR4Q92496 578 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 PRNDQ9UKY0 176 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 STRAPQ9Y3F4 350 aaKnown RBP7.35□□□□□ -1.23
CPNE4-213ENST00000515418 SOX21Q9Y651 276 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-213ENST00000515418 ACANP16112 2415 aa7.35□□□□□ -1.23
CPNE4-213ENST00000515418 CR1P17927 2039 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 FLNAP21333 2647 aaKnown RBP7.34□□□□□ -1.23
CPNE4-213ENST00000515418 A0A096LNT2 108 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 BORCS7-ASMTA0A0B4J1R7 106 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 C15orf62A8K5M9 175 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 PMS2P5A8MQ11 134 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 FCN1O00602 326 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 IGKV1D-33P01593 117 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 IGKV1-33P01594 117 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 NMBP08949 121 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 HOXA1P49639 335 aaPredicted RBP7.34□□□□□ -1.23
CPNE4-213ENST00000515418 RAB14P61106 215 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 BAXQ07812 192 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 HES1Q14469 280 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 RUSC1-AS1Q66K80 236 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 BRD3OSQ6XYD6 125 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 TMEM167AQ8TBQ9 72 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 CXorf58Q96LI9 332 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 CIB3Q96Q77 187 aaPredicted RBP7.34□□□□□ -1.23
CPNE4-213ENST00000515418 SLC25A32Q9H2D1 315 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 HIPK2Q9H2X6 1198 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 FBXL15Q9H469 300 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 C7orf69Q9H7B7 122 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 HIF1ANQ9NWT6 349 aa7.34□□□□□ -1.23
CPNE4-213ENST00000515418 A0A1B0GW64 132 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 CGB1A6NKQ9 187 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 B4DSR2 109 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 AVPP01185 164 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 SNRNP70P08621 437 aaKnown RBP7.33□□□□□ -1.24
CPNE4-213ENST00000515418 FAM157CP0CG43 387 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 APELAP0DMC3 54 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 SLC25A16P16260 332 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 RUNX1Q01196 453 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 VMA21Q3ZAQ7 101 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 PDLIM3Q53GG5 364 aaPredicted RBP7.33□□□□□ -1.24
CPNE4-213ENST00000515418 CLLU1Q5K131 121 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 Q5PR19 223 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 FAM120AOSQ5T036 256 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 COMMD5Q9GZQ3 224 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 ARV1Q9H2C2 271 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 BEX4Q9NWD9 120 aaPredicted RBP7.33□□□□□ -1.24
CPNE4-213ENST00000515418 METTL1Q9UBP6 276 aaKnown RBP7.33□□□□□ -1.24
CPNE4-213ENST00000515418 AUP1Q9Y679 476 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 NPFFO15130 113 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 CRYGBP07316 175 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 FGF2P09038 288 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 IGHV4-38-2P0DP08 117 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 CD1BP29016 333 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 GNB1P62873 340 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 PRCDQ00LT1 54 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 SLC38A11Q08AI6 406 aa7.33□□□□□ -1.24
CPNE4-213ENST00000515418 MINOS1Q5TGZ0 78 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms