RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 UPK2O00526 184 aa18.71■□□□□ 0.59
SNF8-213ENST00000514929 RPA2P15927 270 aa18.71■□□□□ 0.59
SNF8-213ENST00000514929 ZNF182P17025 639 aaPredicted RBP18.71■□□□□ 0.59
SNF8-213ENST00000514929 F2RP25116 425 aa18.71■□□□□ 0.59
SNF8-213ENST00000514929 PSMB6P28072 239 aa18.71■□□□□ 0.59
SNF8-213ENST00000514929 RCVRNP35243 200 aa18.71■□□□□ 0.59
SNF8-213ENST00000514929 ERVK-16P61578 105 aa18.71■□□□□ 0.59
SNF8-213ENST00000514929 COMMD5Q9GZQ3 224 aa18.71■□□□□ 0.59
SNF8-213ENST00000514929 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.7■□□□□ 0.58
SNF8-213ENST00000514929 TRAV3A0A0B4J244 114 aa18.7■□□□□ 0.58
SNF8-213ENST00000514929 BMPR1BO00238 502 aa18.7■□□□□ 0.58
SNF8-213ENST00000514929 GPR31O00270 319 aa18.7■□□□□ 0.58
SNF8-213ENST00000514929 CRYGCP07315 174 aa18.7■□□□□ 0.58
SNF8-213ENST00000514929 FAM209BQ5JX69 171 aa18.7■□□□□ 0.58
SNF8-213ENST00000514929 REG1AP05451 166 aa18.69■□□□□ 0.58
SNF8-213ENST00000514929 DEFA4P12838 97 aa18.69■□□□□ 0.58
SNF8-213ENST00000514929 CTRB1P17538 263 aa18.69■□□□□ 0.58
SNF8-213ENST00000514929 OR2B8PP59922 312 aa18.69■□□□□ 0.58
SNF8-213ENST00000514929 CTRB2Q6GPI1 263 aa18.69■□□□□ 0.58
SNF8-213ENST00000514929 IL34Q6ZMJ4 242 aa18.69■□□□□ 0.58
SNF8-213ENST00000514929 GPR141Q7Z602 305 aa18.69■□□□□ 0.58
SNF8-213ENST00000514929 DGCR14Q96DF8 476 aaKnown RBP18.69■□□□□ 0.58
SNF8-213ENST00000514929 PEMTQ9UBM1 199 aa18.69■□□□□ 0.58
SNF8-213ENST00000514929 CGB1A6NKQ9 187 aa18.68■□□□□ 0.58
SNF8-213ENST00000514929 HIST1H1BP16401 226 aaKnown RBP18.68■□□□□ 0.58
SNF8-213ENST00000514929 S100GP29377 79 aa18.68■□□□□ 0.58
SNF8-213ENST00000514929 LPAR6P43657 344 aa18.68■□□□□ 0.58
SNF8-213ENST00000514929 PHLDA2Q53GA4 152 aa18.68■□□□□ 0.58
SNF8-213ENST00000514929 RNASE12Q5GAN4 147 aaKnown RBP18.68■□□□□ 0.58
SNF8-213ENST00000514929 LPCAT3Q6P1A2 487 aa18.68■□□□□ 0.58
SNF8-213ENST00000514929 FANCD2OSQ96PS1 177 aa18.68■□□□□ 0.58
SNF8-213ENST00000514929 MARCH11A6NNE9 402 aa18.67■□□□□ 0.58
SNF8-213ENST00000514929 H0Y980 276 aa18.67■□□□□ 0.58
SNF8-213ENST00000514929 NDUFB8O95169 186 aa18.67■□□□□ 0.58
SNF8-213ENST00000514929 CSN3P07498 182 aa18.67■□□□□ 0.58
SNF8-213ENST00000514929 FCAMRQ8WWV6 532 aa18.67■□□□□ 0.58
SNF8-213ENST00000514929 EXTL2Q9UBQ6 330 aa18.67■□□□□ 0.58
SNF8-213ENST00000514929 U3KQK5 164 aa18.67■□□□□ 0.58
SNF8-213ENST00000514929 PPP5D1E7EU14 171 aa18.66■□□□□ 0.58
SNF8-213ENST00000514929 KRASP01116 189 aa18.66■□□□□ 0.58
SNF8-213ENST00000514929 IGHV3-23P01764 117 aa18.66■□□□□ 0.58
SNF8-213ENST00000514929 FGF2P09038 288 aa18.66■□□□□ 0.58
SNF8-213ENST00000514929 ALDH3B2P48448 385 aa18.66■□□□□ 0.58
SNF8-213ENST00000514929 WWC2-AS2Q96NR7 200 aa18.66■□□□□ 0.58
SNF8-213ENST00000514929 SRSF8Q9BRL6 282 aaKnown RBP18.66■□□□□ 0.58
SNF8-213ENST00000514929 QTRT1Q9BXR0 403 aaKnown RBP18.66■□□□□ 0.58
SNF8-213ENST00000514929 SIGLEC8Q9NYZ4 499 aa18.66■□□□□ 0.58
SNF8-213ENST00000514929 S4R3C0 116 aa18.66■□□□□ 0.58
SNF8-213ENST00000514929 GGCTO75223 188 aaKnown RBP18.65■□□□□ 0.58
SNF8-213ENST00000514929 EEF1AKMT3Q96AZ1 226 aa18.65■□□□□ 0.58
SNF8-213ENST00000514929 IGLV11-55A0A075B6I3 123 aa18.64■□□□□ 0.57
SNF8-213ENST00000514929 IGLC7A0M8Q6 106 aa18.64■□□□□ 0.57
SNF8-213ENST00000514929 M0QYG6 137 aa18.64■□□□□ 0.57
SNF8-213ENST00000514929 FRMD6-AS1P0C7T7 363 aa18.64■□□□□ 0.57
SNF8-213ENST00000514929 G6PCP35575 357 aa18.64■□□□□ 0.57
SNF8-213ENST00000514929 ZNF585BQ52M93 769 aa18.64■□□□□ 0.57
SNF8-213ENST00000514929 CLEC19AQ6UXS0 136 aa18.64■□□□□ 0.57
SNF8-213ENST00000514929 KLK11Q9UBX7 282 aa18.64■□□□□ 0.57
SNF8-213ENST00000514929 SNAPC5O75971 98 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 HLA-AP01891 365 aaKnown RBP18.63■□□□□ 0.57
SNF8-213ENST00000514929 IFNA6P05013 189 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 TRAPPC2P0DI81 140 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 TRAPPC2BP0DI82 140 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 KLK9Q2XQG4 91 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 THOC7Q6I9Y2 204 aaKnown RBP18.63■□□□□ 0.57
SNF8-213ENST00000514929 LCN12Q6JVE5 192 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 TBC1D26Q86UD7 250 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 SLC38A6Q8IZM9 456 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 OR10W1Q8NGF6 305 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 OR1L8Q8NGR8 309 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 OR52I2Q8NH67 350 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 CCDC140Q96MF4 163 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 KLK9Q9UKQ9 250 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 DMRT1Q9Y5R6 373 aa18.63■□□□□ 0.57
SNF8-213ENST00000514929 TEX50A0A1B0GTY4 177 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 RGS5O15539 181 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 OR2C1O95371 312 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 ARL3P36405 182 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 UCP3P55916 312 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 RNASE10Q5GAN6 216 aaKnown RBP18.62■□□□□ 0.57
SNF8-213ENST00000514929 CLVS1Q8IUQ0 354 aaPredicted RBP18.62■□□□□ 0.57
SNF8-213ENST00000514929 Q8N402 240 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 C15orf40Q8WUR7 153 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 CXorf58Q96LI9 332 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 HINT2Q9BX68 163 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 THYN1Q9P016 225 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 NSG2Q9Y328 171 aa18.62■□□□□ 0.57
SNF8-213ENST00000514929 CYB5BO43169 146 aa18.61■□□□□ 0.57
SNF8-213ENST00000514929 TPPPO94811 219 aa18.61■□□□□ 0.57
SNF8-213ENST00000514929 SPCS2Q15005 226 aa18.61■□□□□ 0.57
SNF8-213ENST00000514929 HSD17B13Q7Z5P4 300 aaPredicted RBP18.61■□□□□ 0.57
SNF8-213ENST00000514929 SBSPONQ8IVN8 264 aa18.61■□□□□ 0.57
SNF8-213ENST00000514929 SGPP2Q8IWX5 399 aa18.61■□□□□ 0.57
SNF8-213ENST00000514929 CADM3Q8N126 398 aa18.61■□□□□ 0.57
SNF8-213ENST00000514929 Q8N1Y9 231 aa18.61■□□□□ 0.57
SNF8-213ENST00000514929 ABHD1Q96SE0 405 aa18.61■□□□□ 0.57
SNF8-213ENST00000514929 FAM212BQ9NTI7 297 aaPredicted RBP18.61■□□□□ 0.57
SNF8-213ENST00000514929 TRBV7-1A0A0A6YYK4 115 aa18.6■□□□□ 0.57
SNF8-213ENST00000514929 MFSD2BA6NFX1 497 aa18.6■□□□□ 0.57
SNF8-213ENST00000514929 OR13C7P0DN81 318 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms