RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ZNF471Q9BX82 626 aaPredicted RBP7.99□□□□□ -1.13
TPM3-221ENST00000513769 MS4A7Q9GZW8 240 aaPredicted RBP7.99□□□□□ -1.13
TPM3-221ENST00000513769 ARV1Q9H2C2 271 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 TMEM140Q9NV12 185 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 APCP25054 2843 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 USF3Q68DE3 2245 aa7.99□□□□□ -1.13
TPM3-221ENST00000513769 SRRM4A7MD48 611 aaKnown RBP7.98□□□□□ -1.13
TPM3-221ENST00000513769 SSSCA1O60232 199 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 SOX15O60248 233 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 TSPAN9O75954 239 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 IFNA17P01571 189 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 ARG1P05089 322 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 SEC11BP0C7V7 166 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 CAV2P51636 162 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 NHLH2Q02577 135 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 LOXL1Q08397 574 aaPredicted RBP7.98□□□□□ -1.13
TPM3-221ENST00000513769 EXOSC2Q13868 293 aaKnown RBP7.98□□□□□ -1.13
TPM3-221ENST00000513769 EBI3Q14213 229 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 CLEC12BQ2HXU8 276 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 DEFB113Q30KQ7 82 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 VMA21Q3ZAQ7 101 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 OR2B11Q5JQS5 317 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 TPTE2P1Q5T6R2 138 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 HCP5Q6MZN7 132 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 TMEM14EPQ6UXP3 125 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 MRPL41Q8IXM3 137 aaKnown RBP7.98□□□□□ -1.13
TPM3-221ENST00000513769 DTD1Q8TEA8 209 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 PINX1Q96BK5 328 aaKnown RBP7.98□□□□□ -1.13
TPM3-221ENST00000513769 MRPL20Q9BYC9 149 aaKnown RBP7.98□□□□□ -1.13
TPM3-221ENST00000513769 PARD6GQ9BYG4 376 aaPredicted RBP7.98□□□□□ -1.13
TPM3-221ENST00000513769 KRTAP9-9Q9BYP9 154 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 KRTAP9-4Q9BYQ2 154 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 MAGT1Q9H0U3 335 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 RBKSQ9H477 322 aa7.98□□□□□ -1.13
TPM3-221ENST00000513769 STRAPQ9Y3F4 350 aaKnown RBP7.98□□□□□ -1.13
TPM3-221ENST00000513769 F8P00451 2351 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 TRAV20A0A0B4J274 112 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 FAM24AA6NFZ4 105 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 MSGN1A6NI15 193 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 C15orf61A6NNL5 157 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 SPDEFO95238 335 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 TMEM50AO95807 157 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 IGKV1-16P04430 117 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 OR8U8P0C7N1 319 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 OR9G9P0C7N8 305 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 BRS3P32247 399 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 RAB5CP51148 216 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 RAB11AP62491 216 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 LCN2P80188 198 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 EWSR1Q01844 656 aaKnown RBP eCLIP7.97□□□□□ -1.13
TPM3-221ENST00000513769 VMO1Q7Z5L0 202 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 HSD17B13Q7Z5P4 300 aaPredicted RBP7.97□□□□□ -1.13
TPM3-221ENST00000513769 MOB3BQ86TA1 216 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 MMD2Q8IY49 270 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 OR10P1Q8NGE3 313 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 OR1S2Q8NGQ3 325 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 RNF141Q8WVD5 230 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 GNPNAT1Q96EK6 184 aaPredicted RBP7.97□□□□□ -1.13
TPM3-221ENST00000513769 SAT2Q96F10 170 aaPredicted RBP7.97□□□□□ -1.13
TPM3-221ENST00000513769 FANCD2OSQ96PS1 177 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 SRSF8Q9BRL6 282 aaKnown RBP7.97□□□□□ -1.13
TPM3-221ENST00000513769 GINS3Q9BRX5 216 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 NARFLQ9H6Q4 476 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 MMP26Q9NRE1 261 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 MED9Q9NWA0 146 aa7.97□□□□□ -1.13
TPM3-221ENST00000513769 CSMD1Q96PZ7 3565 aa7.96□□□□□ -1.13
TPM3-221ENST00000513769 IGHV4-61A0A0C4DH41 118 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 A0A1W2PN81 502 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 CEBPZOSA8MTT3 80 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 J3QLI3 93 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 CFDP00746 253 aaPredicted RBP7.96□□□□□ -1.14
TPM3-221ENST00000513769 IFNA5P01569 189 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 CRYGBP07316 175 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 SNRNP70P08621 437 aaKnown RBP7.96□□□□□ -1.14
TPM3-221ENST00000513769 CHRNA7P36544 502 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 VDAC2P45880 294 aaPredicted RBP7.96□□□□□ -1.14
TPM3-221ENST00000513769 RPL8P62917 257 aaKnown RBP7.96□□□□□ -1.14
TPM3-221ENST00000513769 ERHP84090 104 aaKnown RBP7.96□□□□□ -1.14
TPM3-221ENST00000513769 IZUMO4Q1ZYL8 232 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 NPBQ8NG41 125 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 OR1L8Q8NGR8 309 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 PERPQ96FX8 193 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 HARBI1Q96MB7 349 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 QTRT1Q9BXR0 403 aaKnown RBP7.96□□□□□ -1.14
TPM3-221ENST00000513769 COMMD5Q9GZQ3 224 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 ENY2Q9NPA8 101 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 NUP50Q9UKX7 468 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 OR51B2Q9Y5P1 312 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 PDZD2O15018 2839 aa7.96□□□□□ -1.14
TPM3-221ENST00000513769 IGHV4-30-2A0A087WSY4 118 aa7.95□□□□□ -1.14
TPM3-221ENST00000513769 TEX50A0A1B0GTY4 177 aa7.95□□□□□ -1.14
TPM3-221ENST00000513769 LINC00862A6NCI5 91 aa7.95□□□□□ -1.14
TPM3-221ENST00000513769 NUDT19A8MXV4 375 aa7.95□□□□□ -1.14
TPM3-221ENST00000513769 UMAD1C9J7I0 102 aa7.95□□□□□ -1.14
TPM3-221ENST00000513769 FAM157AC9JC47 383 aa7.95□□□□□ -1.14
TPM3-221ENST00000513769 FNDC10F2Z333 226 aa7.95□□□□□ -1.14
TPM3-221ENST00000513769 RNASEK-C17orf49H0YIS7 233 aa7.95□□□□□ -1.14
TPM3-221ENST00000513769 KCNAB3O43448 404 aa7.95□□□□□ -1.14
TPM3-221ENST00000513769 MOSP00540 346 aa7.95□□□□□ -1.14
TPM3-221ENST00000513769 IGLV2-23P01705 113 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms