RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 RBFOX2O43251 390 aaKnown RBP eCLIP11.28□□□□□ -0.61e-7■□□□□ 10
UBE2D3-228ENST00000508974 NDUFB8O95169 186 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 APOA1P02647 267 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 CSN3P07498 182 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 DEFA4P12838 97 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 NQO2P16083 231 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 NAT1P18440 290 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 PSMB6P28072 239 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 TAS2R31P59538 309 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 DHRS11Q6UWP2 260 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 LYSMD2Q8IV50 215 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 SELENOKQ9Y6D0 94 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 IZUMO1RA6ND01 250 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 UPK2O00526 184 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 PGLYRP1O75594 196 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 EDN2P20800 178 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 LPAR6P43657 344 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 RORCP51449 518 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 TSPAN5P62079 268 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 PHLDA2Q53GA4 152 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 C4orf48Q5BLP8 95 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 GPR107Q5VW38 600 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 OR6F1Q8NGZ6 308 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 OR4A5Q8NH83 315 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 GPX8Q8TED1 209 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 BORCS5Q969J3 196 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 FANCD2OSQ96PS1 177 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 AIFM2Q9BRQ8 373 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 COMMD5Q9GZQ3 224 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 ZC4H2Q9NQZ6 224 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 PEMTQ9UBM1 199 aa11.27□□□□□ -0.61
UBE2D3-228ENST00000508974 TENM3Q9P273 2699 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 OR2C1O95371 312 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 DHFRP00374 187 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 IGHV4-30-4P0DP06 118 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 CTRB1P17538 263 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 OR2B8PP59922 312 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 ERVK-16P61578 105 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 CTF1Q16619 201 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 CTRB2Q6GPI1 263 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 Q8N1Y9 231 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 OR10W1Q8NGF6 305 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 CD300LFQ8TDQ1 290 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 FCAMRQ8WWV6 532 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 HINT2Q9BX68 163 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 PLEKHA2Q9HB19 425 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 COMMD9Q9P000 198 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 NSG2Q9Y328 171 aa11.26□□□□□ -0.61
UBE2D3-228ENST00000508974 MFSD2BA6NFX1 497 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 MARCH11A6NNE9 402 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 H0Y980 276 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 M0QYG6 137 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 GPR31O00270 319 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 GABARAPO95166 117 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 KRASP01116 189 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 CRYGCP07315 174 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 F2RP25116 425 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 G6PCP35575 357 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 ARL3P36405 182 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 POU2AF1Q16633 256 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 LCN12Q6JVE5 192 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 MZT2AQ6P582 158 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 CMTM1Q8IZ96 169 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 EEF1AKMT3Q96AZ1 226 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 DGCR14Q96DF8 476 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 DMRT1Q9Y5R6 373 aa11.25□□□□□ -0.61
UBE2D3-228ENST00000508974 HUWE1Q7Z6Z7 4374 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 GGCTO75223 188 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 RCVRNP35243 200 aa11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 ADAMTSL5Q6ZMM2 481 aa11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 SGPP2Q8IWX5 399 aa11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 CMTM3Q96MX0 182 aa11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 RCHY1Q96PM5 261 aa11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 QTRT1Q9BXR0 403 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 SCPEP1Q9HB40 452 aa11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 EXTL2Q9UBQ6 330 aa11.24□□□□□ -0.61
UBE2D3-228ENST00000508974 IGLV11-55A0A075B6I3 123 aa11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 TEX50A0A1B0GTY4 177 aa11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 ZNF320A2RRD8 509 aa11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 HIST1H1BP16401 226 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 ZNF585BQ52M93 769 aa11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 TBC1D26Q86UD7 250 aa11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 GTSCR1Q86UQ5 136 aa11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 Q8N402 240 aa11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 CACNG8Q8WXS5 425 aa11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 AP3S1Q92572 193 aa11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 MRPS26Q9BYN8 205 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 STAB2Q8WWQ8 2551 aa11.23□□□□□ -0.61
UBE2D3-228ENST00000508974 IGHV3-35A0A0C4DH35 117 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 TRAPPC2P0DI81 140 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 TRAPPC2BP0DI82 140 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 OR13C7P0DN81 318 aa11.22□□□□□ -0.61
UBE2D3-228ENST00000508974 ZNF182P17025 639 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms