RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 P2RX4Q99571 388 aa6.53□□□□□ -1.36
SCN1A-207ENST00000507401 HIST1H2BLQ99880 126 aa6.53□□□□□ -1.36
SCN1A-207ENST00000507401 SLC25A31Q9H0C2 315 aa6.53□□□□□ -1.36
SCN1A-207ENST00000507401 MEGF9Q9H1U4 602 aa6.53□□□□□ -1.36
SCN1A-207ENST00000507401 GPR173Q9NS66 373 aa6.53□□□□□ -1.36
SCN1A-207ENST00000507401 ZNRD1Q9P1U0 126 aa6.53□□□□□ -1.36
SCN1A-207ENST00000507401 FBXL17Q9UF56 701 aa6.53□□□□□ -1.36
SCN1A-207ENST00000507401 C14orf166Q9Y224 244 aaKnown RBP6.53□□□□□ -1.36
SCN1A-207ENST00000507401 A0A1W2PPQ1 181 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 RBFOX3A6NFN3 312 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 H3BQ15 152 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 K7N7A8 449 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 NXPH2O95156 264 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 PRH1P02810 166 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 OMGP23515 440 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 RPL31P62899 125 aaKnown RBP6.52□□□□□ -1.37
SCN1A-207ENST00000507401 ZNF616Q08AN1 781 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 DMRTC1Q5HYR2 192 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 TMEM200BQ69YZ2 307 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 LHFPL1Q86WI0 220 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 Q8IYB0 196 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 C11orf42Q8N5U0 333 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 LRTM2Q8N967 370 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 OR2D3Q8NGH3 330 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 KCNG3Q8TAE7 436 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 ISOC2Q96AB3 205 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 FGGYQ96C11 551 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 RHOVQ96L33 236 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 ZNF488Q96MN9 340 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 WNT10AQ9GZT5 417 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 C16orf95Q9H693 158 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 SRD5A3Q9H8P0 318 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 TNFRSF19Q9NS68 423 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 MTCH1Q9NZJ7 389 aa6.52□□□□□ -1.37
SCN1A-207ENST00000507401 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
SCN1A-207ENST00000507401 A0A1W2PN81 502 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 C17orf98A8MV24 154 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 C9JQL5 133 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 RBP4P02753 201 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 TFF1P04155 84 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 GZMBP10144 247 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 FABP4P15090 132 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 HRH1P35367 487 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 SAA4P35542 130 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 CHRNA7P36544 502 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 FAM3BP58499 235 aaPredicted RBP6.51□□□□□ -1.37
SCN1A-207ENST00000507401 HLA-DRB3P79483 266 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 MEF2CQ06413 473 aaPredicted RBP6.51□□□□□ -1.37
SCN1A-207ENST00000507401 BAXQ07812 192 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 RAB32Q13637 225 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 CNN3Q15417 329 aaKnown RBP6.51□□□□□ -1.37
SCN1A-207ENST00000507401 ODF4Q2M2E3 257 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 AKIRIN2Q53H80 203 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 C1orf194Q5T5A4 169 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 HCP5Q6MZN7 132 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 ZNF429Q86V71 674 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 MKXQ8IYA7 352 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 FAM185AQ8N0U4 392 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 SLC24A4Q8NFF2 622 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 OR10A7Q8NGE5 316 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 OR51A2Q8NGJ7 313 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 OR5H2Q8NGV7 314 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 LINC01006Q8NI28 216 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 BORCS8Q96FH0 119 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 BSCL2Q96G97 398 aaPredicted RBP6.51□□□□□ -1.37
SCN1A-207ENST00000507401 SNX22Q96L94 193 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 CITED1Q99966 193 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 URM1Q9BTM9 101 aaKnown RBP6.51□□□□□ -1.37
SCN1A-207ENST00000507401 OR14J1Q9UGF5 321 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 VPREB3Q9UKI3 123 aa6.51□□□□□ -1.37
SCN1A-207ENST00000507401 TRRAPQ9Y4A5 3859 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 IGKV1-27A0A075B6S5 117 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 KIR2DL5BA0A0G2JN68 375 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 KIR2DL5BA0A0G2JPC4 375 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 TMEM235A6NFC5 223 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 MSGN1A6NI15 193 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 SERPINE3A8MV23 424 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 AGPAT2O15120 278 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 CYB5BO43169 146 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 ZNF737O75373 536 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 MMP23AO75900 390 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 IFNA1P01562 189 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 PMP2P02689 132 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 ARG1P05089 322 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 CTSDP07339 412 aaPredicted RBP6.5□□□□□ -1.37
SCN1A-207ENST00000507401 TMEM225BP0DP42 221 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 OR10J1P30954 320 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 PROK1P58294 105 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 ERVFRD-1P60508 538 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 RPS20P60866 119 aaKnown RBP6.5□□□□□ -1.37
SCN1A-207ENST00000507401 S100A10P60903 97 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 COL10A1Q03692 680 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 ZNF146Q15072 292 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 IAH1Q2TAA2 248 aaPredicted RBP6.5□□□□□ -1.37
SCN1A-207ENST00000507401 Q6ZSV7 163 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 LYPD6Q86Y78 171 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 KIR2DL5AQ8N109 375 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 SLC35G3Q8N808 338 aa6.5□□□□□ -1.37
SCN1A-207ENST00000507401 OR52N4Q8NGI2 321 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms