RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 GPN1Q9HCN4 374 aaPredicted RBP11.66□□□□□ -0.54
DSP-203ENST00000506617 COA4Q9NYJ1 87 aa11.66□□□□□ -0.54
DSP-203ENST00000506617 PRNDQ9UKY0 176 aa11.66□□□□□ -0.54
DSP-203ENST00000506617 TMED3Q9Y3Q3 217 aa11.66□□□□□ -0.54
DSP-203ENST00000506617 AP4M1O00189 453 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 FCN1O00602 326 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 SNAPC5O75971 98 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 ACTL6BO94805 426 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 SLC25A6P12236 298 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 HLA-GP17693 338 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 OXA1LQ15070 435 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 ANKRD55Q3KP44 614 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 PRR31Q5SQ13 230 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 THOC7Q6I9Y2 204 aaKnown RBP11.65□□□□□ -0.54
DSP-203ENST00000506617 SLC35E3Q7Z769 313 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 WIPF2Q8TF74 440 aaPredicted RBP11.65□□□□□ -0.54
DSP-203ENST00000506617 PHB2Q99623 299 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 SRSF8Q9BRL6 282 aaKnown RBP11.65□□□□□ -0.54
DSP-203ENST00000506617 TMEM14BQ9NUH8 114 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 ZNF257Q9Y2Q1 563 aa11.65□□□□□ -0.54
DSP-203ENST00000506617 CA2P00918 260 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 AKR1C2P52895 323 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 SSBP2P81877 361 aaPredicted RBP11.64□□□□□ -0.55
DSP-203ENST00000506617 FXYD3Q14802 87 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 NMSQ5H8A3 153 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 SSX9Q7RTT3 188 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 SLC35G3Q8N808 338 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 OR5B3Q8NH48 314 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 ARPC1AQ92747 370 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 SPIN2AQ99865 258 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 SPIN2BQ9BPZ2 258 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 HSPB9Q9BQS6 159 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 TPSG1Q9NRR2 321 aa11.64□□□□□ -0.55
DSP-203ENST00000506617 FOXA2Q9Y261 457 aaPredicted RBP11.64□□□□□ -0.55
DSP-203ENST00000506617 FBN3Q75N90 2809 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 A0A1B0GU03 582 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 DBX1A6NMT0 343 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 C15orf61A6NNL5 157 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 M0QZ24 198 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 FBXO24O75426 580 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 CD28P10747 220 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 TMEM267Q0VDI3 215 aaPredicted RBP11.63□□□□□ -0.55
DSP-203ENST00000506617 PJVKQ0ZLH3 352 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 PDLIM3Q53GG5 364 aaPredicted RBP11.63□□□□□ -0.55
DSP-203ENST00000506617 AKIRIN2Q53H80 203 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 HSD17B13Q7Z5P4 300 aaPredicted RBP11.63□□□□□ -0.55
DSP-203ENST00000506617 CASTOR1Q8WTX7 329 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 CHPT1Q8WUD6 406 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 COMMD5Q9GZQ3 224 aa11.63□□□□□ -0.55
DSP-203ENST00000506617 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.63□□□□□ -0.55
DSP-203ENST00000506617 CMYA5Q8N3K9 4069 aa11.62□□□□□ -0.55
DSP-203ENST00000506617 A0A0B4J293 547 aa11.62□□□□□ -0.55
DSP-203ENST00000506617 CNIH1O95406 144 aa11.62□□□□□ -0.55
DSP-203ENST00000506617 BRI3O95415 125 aa11.62□□□□□ -0.55
DSP-203ENST00000506617 EGR2P11161 476 aaPredicted RBP11.62□□□□□ -0.55
DSP-203ENST00000506617 C19orf54Q5BKX5 351 aa11.62□□□□□ -0.55
DSP-203ENST00000506617 LYZL2Q7Z4W2 148 aa11.62□□□□□ -0.55
DSP-203ENST00000506617 COMMD1Q8N668 190 aa11.62□□□□□ -0.55
DSP-203ENST00000506617 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
DSP-203ENST00000506617 OR4A16Q8NH70 328 aa11.62□□□□□ -0.55
DSP-203ENST00000506617 C7orf66A4D0T2 115 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 INS-IGF2F8WCM5 200 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 TSPAN15O95858 294 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 IFNA21P01568 189 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 OR9G9P0C7N8 305 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 SPNP16150 400 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 OR2B8PP59922 312 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 HSPE1P61604 102 aaKnown RBP11.61□□□□□ -0.55
DSP-203ENST00000506617 TNXAQ16473 311 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 C10orf99Q6UWK7 81 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 STPG2Q8N412 459 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 C12orf45Q8N5I9 185 aaPredicted RBP11.61□□□□□ -0.55
DSP-203ENST00000506617 OR1L8Q8NGR8 309 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 RNASE11Q8TAA1 199 aaKnown RBP11.61□□□□□ -0.55
DSP-203ENST00000506617 SRSF12Q8WXF0 261 aaKnown RBP11.61□□□□□ -0.55
DSP-203ENST00000506617 GPR146Q96CH1 333 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 CLCC1Q96S66 551 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 MGAM2Q2M2H8 2515 aa11.61□□□□□ -0.55
DSP-203ENST00000506617 TRAV3A0A0B4J244 114 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 TEX50A0A1B0GTY4 177 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 LINC01548A6NM66 108 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 ATP6V0E1O15342 81 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 SULT1A3P0DMM9 295 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 SULT1A4P0DMN0 295 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 RPL27AP46776 148 aaKnown RBP11.6□□□□□ -0.55
DSP-203ENST00000506617 SLC35B1P78383 322 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 NDPQ00604 133 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 CFHR3Q02985 330 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 SMCO1Q147U7 214 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 C2orf68Q2NKX9 166 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 TREML4Q6UXN2 200 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 Q6ZRM9 215 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 CENPVQ7Z7K6 275 aaPredicted RBP11.6□□□□□ -0.55
DSP-203ENST00000506617 MRPL41Q8IXM3 137 aaKnown RBP11.6□□□□□ -0.55
DSP-203ENST00000506617 OR5AU1Q8NGC0 362 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 NOL4LQ96MY1 436 aaPredicted RBP11.6□□□□□ -0.55
DSP-203ENST00000506617 CITED2Q99967 270 aaPredicted RBP11.6□□□□□ -0.55
DSP-203ENST00000506617 SEC22CQ9BRL7 303 aa11.6□□□□□ -0.55
DSP-203ENST00000506617 QTRT1Q9BXR0 403 aaKnown RBP11.6□□□□□ -0.55
DSP-203ENST00000506617 PARP11Q9NR21 331 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms