RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 GPHA2Q96T91 129 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 SPATA2Q9UM82 520 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 UFC1Q9Y3C8 167 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 RPL8P62917 257 aaKnown RBP10.84□□□□□ -0.67
TRAF4-212ENST00000498540 PLET1Q6UQ28 207 aa10.84□□□□□ -0.67
TRAF4-212ENST00000498540 TMEM190Q8WZ59 177 aa10.84□□□□□ -0.67
TRAF4-212ENST00000498540 HSD17B10Q99714 261 aaKnown RBP10.84□□□□□ -0.67
TRAF4-212ENST00000498540 CENPOQ9BU64 300 aa10.84□□□□□ -0.67
TRAF4-212ENST00000498540 ZNF436Q9C0F3 470 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-212ENST00000498540 MAP6D1Q9H9H5 199 aa10.84□□□□□ -0.67
TRAF4-212ENST00000498540 TAS2R8Q9NYW2 309 aa10.84□□□□□ -0.67
TRAF4-212ENST00000498540 SLC22A5O76082 557 aa10.83□□□□□ -0.68
TRAF4-212ENST00000498540 RPA2P15927 270 aa10.83□□□□□ -0.68
TRAF4-212ENST00000498540 HLA-GP17693 338 aa10.83□□□□□ -0.68
TRAF4-212ENST00000498540 RAB6AP20340 208 aa10.83□□□□□ -0.68
TRAF4-212ENST00000498540 DTYMKP23919 212 aa10.83□□□□□ -0.68
TRAF4-212ENST00000498540 PSMA1P25786 263 aaKnown RBP10.83□□□□□ -0.68
TRAF4-212ENST00000498540 RANBP1P43487 201 aa10.83□□□□□ -0.68
TRAF4-212ENST00000498540 NANOS2P60321 138 aaKnown RBP10.83□□□□□ -0.68
TRAF4-212ENST00000498540 RCN1Q15293 331 aa10.83□□□□□ -0.68
TRAF4-212ENST00000498540 OR5B3Q8NH48 314 aa10.83□□□□□ -0.68
TRAF4-212ENST00000498540 IGLC7A0M8Q6 106 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 IFITM5A6NNB3 132 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 TGOLN2O43493 480 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 HRASP01112 189 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 OR2B8PP59922 312 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 MLLT11Q13015 90 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-212ENST00000498540 TIMM50Q3ZCQ8 353 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 OGFRL1Q5TC84 451 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-212ENST00000498540 MFSD4AQ8N468 514 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 GALNT14Q96FL9 552 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 DAZ1Q9NQZ3 744 aaKnown RBP10.82□□□□□ -0.68
TRAF4-212ENST00000498540 SCN3BQ9NY72 215 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 FBXL17Q9UF56 701 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 VPS13DQ5THJ4 4388 aa10.82□□□□□ -0.68
TRAF4-212ENST00000498540 IGHV3OR16-8A0A075B7F1 116 aa10.81□□□□□ -0.68
TRAF4-212ENST00000498540 OR2T8A6NH00 312 aa10.81□□□□□ -0.68
TRAF4-212ENST00000498540 PTBP1P26599 531 aaKnown RBP eCLIP10.81□□□□□ -0.68
TRAF4-212ENST00000498540 ZNF124Q15973 351 aa10.81□□□□□ -0.68
TRAF4-212ENST00000498540 APRG1Q8IVJ8 170 aa10.81□□□□□ -0.68
TRAF4-212ENST00000498540 ATG5Q9H1Y0 275 aa10.81□□□□□ -0.68
TRAF4-212ENST00000498540 HRASLSQ9HDD0 168 aa10.81□□□□□ -0.68
TRAF4-212ENST00000498540 BET1LQ9NYM9 111 aa10.81□□□□□ -0.68
TRAF4-212ENST00000498540 TRAV3A0A0B4J244 114 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 METTL21EPA6NDL7 271 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 OR4C46A6NHA9 309 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 TNFSF12O43508 249 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
TRAF4-212ENST00000498540 CTXN2P0C2S0 81 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 RBMS2Q15434 407 aaKnown RBP10.8□□□□□ -0.68
TRAF4-212ENST00000498540 SSX1Q16384 188 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 CDNFQ49AH0 187 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 LAMTOR1Q6IAA8 161 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 ZNF66Q6ZN08 573 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 OR4A5Q8NH83 315 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 C11orf45Q8TAV5 145 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 CD300LFQ8TDQ1 290 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 NUDCD2Q8WVJ2 157 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 ACOT13Q9NPJ3 140 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 DNAH6Q9C0G6 4158 aa10.8□□□□□ -0.68
TRAF4-212ENST00000498540 ERICH4A6NGS2 130 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 PDCD5O14737 125 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 CASQ2O14958 399 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-212ENST00000498540 CTSDP07339 412 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-212ENST00000498540 HACD4Q5VWC8 232 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 CNIH2Q6PI25 160 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 NR2C2APQ86WQ0 139 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 OR10W1Q8NGF6 305 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 MGLLQ99685 303 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 RARRES2Q99969 163 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 CHRDL1Q9BU40 450 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 C20orf24Q9BUV8 137 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
TRAF4-212ENST00000498540 DUSP21Q9H596 190 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 THYN1Q9P016 225 aa10.79□□□□□ -0.68
TRAF4-212ENST00000498540 IGHV3-21A0A0B4J1V1 117 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 TRAV1-2A0A0B4J238 106 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 TMEM235A6NFC5 223 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 RGS10O43665 173 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 ARL6IP1Q15041 203 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 SPAG16Q8N0X2 631 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 VN1R17PQ8TDU5 208 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 BSCL2Q96G97 398 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-212ENST00000498540 MFFQ9GZY8 342 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 CSTL1Q9H114 145 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 DCSTAMPQ9H295 470 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 CCL28Q9NRJ3 127 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 ANXA10Q9UJ72 324 aa10.78□□□□□ -0.68
TRAF4-212ENST00000498540 SMIM30A4D0T7 59 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 MPTX1A8MV57 137 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 F8W735 103 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-212ENST00000498540 NDUFA4O00483 81 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 UPK2O00526 184 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 DEFB4AO15263 64 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 SSX5O60225 188 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 IFNA4P05014 189 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 RAB3BP20337 219 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 GDPD1Q8N9F7 314 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 OR11H2Q8NH07 326 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 C2CD4CQ8TF44 421 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms