RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 MINOS1-NBL1R4GNA1 71 aa6.18□□□□□ -1.42
CDC42-205ENST00000498236 USP9YO00507 2555 aaPredicted RBP6.18□□□□□ -1.42
CDC42-205ENST00000498236 IGHV4-30-2A0A087WSY4 118 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 IGHV4-61A0A0C4DH41 118 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 A0A1W2PRX2 142 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 C15orf61A6NNL5 157 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 LEUTXA8MZ59 168 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 OOSP1A8MZH6 123 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 JTBO76095 146 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 SCAF4O95104 1147 aaKnown RBP6.17□□□□□ -1.42
CDC42-205ENST00000498236 TPT1P13693 172 aaKnown RBP6.17□□□□□ -1.42
CDC42-205ENST00000498236 SLC25A16P16260 332 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 COX7A1P24310 79 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 HTR1DP28221 377 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 CEACAM3P40198 252 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 LGALS7P47929 136 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 DVL1P1P54792 670 aaPredicted RBP6.17□□□□□ -1.42
CDC42-205ENST00000498236 SPCS3P61009 180 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 LCN2P80188 198 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 EWSR1Q01844 656 aaKnown RBP eCLIP6.17□□□□□ -1.42
CDC42-205ENST00000498236 PAX8Q06710 450 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 EXOSC2Q13868 293 aaKnown RBP6.17□□□□□ -1.42
CDC42-205ENST00000498236 DIAPH2-AS1Q14236 149 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 HABP2Q14520 560 aaPredicted RBP6.17□□□□□ -1.42
CDC42-205ENST00000498236 TPTE2P1Q5T6R2 138 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 LCNL1Q6ZST4 164 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 VMO1Q7Z5L0 202 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 PUSL1Q8N0Z8 303 aaKnown RBP6.17□□□□□ -1.42
CDC42-205ENST00000498236 OR8H3Q8N146 312 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 PNKDQ8N490 385 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 TMEM252Q8N6L7 170 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 UBAC2Q8NBM4 344 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 OR4A16Q8NH70 328 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 OR4A5Q8NH83 315 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 VSTM2AQ8TAG5 236 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 SCARB1Q8WTV0 552 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 FLYWCH2Q96CP2 140 aaKnown RBP6.17□□□□□ -1.42
CDC42-205ENST00000498236 PERPQ96FX8 193 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 RNF5Q99942 180 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 ZNF471Q9BX82 626 aaPredicted RBP6.17□□□□□ -1.42
CDC42-205ENST00000498236 ARV1Q9H2C2 271 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 RBKSQ9H477 322 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 ZC4H2Q9NQZ6 224 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 MMP26Q9NRE1 261 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 FKBP11Q9NYL4 201 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 DPM3Q9P2X0 92 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 FBXL17Q9UF56 701 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 ITGB1BP2Q9UKP3 347 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 PRNDQ9UKY0 176 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 ZNF257Q9Y2Q1 563 aa6.17□□□□□ -1.42
CDC42-205ENST00000498236 ARID1AO14497 2285 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 IGHV1-3A0A0C4DH29 117 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 A0A1W2PPI3 338 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 IGSF23A1L1A6 192 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 FAM24AA6NFZ4 105 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 SRRM4A7MD48 611 aaKnown RBP6.16□□□□□ -1.42
CDC42-205ENST00000498236 FAM157AC9JC47 383 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 H7C2Y5 167 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 UPK2O00526 184 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 ARG1P05089 322 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 CD1BP29016 333 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 REG1BP48304 166 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 SULT1A1P50225 295 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 CAV2P51636 162 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 UBE2E1P51965 193 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 CLLU1Q5K131 121 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 CCDC144NLQ6NUI1 221 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 TMEM14EPQ6UXP3 125 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 STX12Q86Y82 276 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 C1QL4Q86Z23 238 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 BAP18Q8IXM2 172 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 VKORC1L1Q8N0U8 176 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 OR5B3Q8NH48 314 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 TMEM167AQ8TBQ9 72 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 DTD1Q8TEA8 209 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 NRGNQ92686 78 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 RPEQ96AT9 228 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 HARBI1Q96MB7 349 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 TBX15Q96SF7 602 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 QTRT1Q9BXR0 403 aaKnown RBP6.16□□□□□ -1.42
CDC42-205ENST00000498236 MS4A7Q9GZW8 240 aaPredicted RBP6.16□□□□□ -1.42
CDC42-205ENST00000498236 SIRT7Q9NRC8 400 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 TBL2Q9Y4P3 447 aaKnown RBP6.16□□□□□ -1.42
CDC42-205ENST00000498236 INSIG2Q9Y5U4 225 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 AKAP6Q13023 2319 aa6.16□□□□□ -1.42
CDC42-205ENST00000498236 UTP20O75691 2785 aaKnown RBP6.15□□□□□ -1.42
CDC42-205ENST00000498236 A0A096LNT2 108 aa6.15□□□□□ -1.42
CDC42-205ENST00000498236 BORCS7-ASMTA0A0B4J1R7 106 aa6.15□□□□□ -1.42
CDC42-205ENST00000498236 TRAV3A0A0B4J244 114 aa6.15□□□□□ -1.42
CDC42-205ENST00000498236 INS-IGF2F8WCM5 200 aa6.15□□□□□ -1.42
CDC42-205ENST00000498236 RNASEK-C17orf49H0YIS7 233 aa6.15□□□□□ -1.42
CDC42-205ENST00000498236 RBMXL2O75526 392 aaKnown RBP6.15□□□□□ -1.42
CDC42-205ENST00000498236 KBTBD11O94819 623 aa6.15□□□□□ -1.42
CDC42-205ENST00000498236 SPDEFO95238 335 aa6.15□□□□□ -1.42
CDC42-205ENST00000498236 IGLV2-23P01705 113 aa6.15□□□□□ -1.42
CDC42-205ENST00000498236 SAA1P0DJI8 122 aaPredicted RBP6.15□□□□□ -1.42
CDC42-205ENST00000498236 USF1P22415 310 aaPredicted RBP6.15□□□□□ -1.42
CDC42-205ENST00000498236 GATA3P23771 443 aa6.15□□□□□ -1.42
CDC42-205ENST00000498236 VDAC2P45880 294 aaPredicted RBP6.15□□□□□ -1.42
CDC42-205ENST00000498236 DLX1P56177 255 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms