RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 RTL8BQ17RB0 113 aa13.67□□□□□ -0.22
LMNA-216ENST00000496738 C10orf91Q5T1B1 145 aa13.67□□□□□ -0.22
LMNA-216ENST00000496738 H2BFWTQ7Z2G1 175 aa13.67□□□□□ -0.22
LMNA-216ENST00000496738 LRRC75A-AS1Q8N1F1 130 aa13.67□□□□□ -0.22
LMNA-216ENST00000496738 RPEQ96AT9 228 aa13.67□□□□□ -0.22
LMNA-216ENST00000496738 FAM212BQ9NTI7 297 aaPredicted RBP13.67□□□□□ -0.22
LMNA-216ENST00000496738 CARHSP1Q9Y2V2 147 aaKnown RBP13.67□□□□□ -0.22
LMNA-216ENST00000496738 A0A096LNT2 108 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 CXorf65A6NEN9 183 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 K7EPK0 472 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 RBFOX2O43251 390 aaKnown RBP eCLIP13.66□□□□□ -0.225e-8■■■□□ 15.8
LMNA-216ENST00000496738 APOA2P02652 100 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 NHLH2Q02577 135 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 FAM71E2Q8N5Q1 922 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 TNFSF18Q9UNG2 199 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 POLR3KQ9Y2Y1 108 aaPredicted RBP13.66□□□□□ -0.22
LMNA-216ENST00000496738 AMMECR1Q9Y4X0 333 aaPredicted RBP13.66□□□□□ -0.22
LMNA-216ENST00000496738 A0A1B0GU03 582 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 ODF3BA8MYP8 253 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 MSMBP08118 114 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 ADCYAP1P18509 176 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 HTR1DP28221 377 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 NKX2-1P43699 371 aaPredicted RBP13.66□□□□□ -0.22
LMNA-216ENST00000496738 PPT1P50897 306 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 TNFRSF9Q07011 255 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 FAM71F2Q6NXP2 309 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 MOB3BQ86TA1 216 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 Q96MF0 132 aa13.66□□□□□ -0.22
LMNA-216ENST00000496738 RCL1Q9Y2P8 373 aaKnown RBP13.66□□□□□ -0.22
LMNA-216ENST00000496738 OR9G9P0C7N8 305 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 P0C879 139 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 OR2B8PP59922 312 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 PEA15Q15121 130 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 PRSS54Q6PEW0 395 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 OR5AN1Q8NGI8 311 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 MAP1AP78559 2803 aaPredicted RBP13.65□□□□□ -0.22
LMNA-216ENST00000496738 IGHV3OR16-10A0A075B7F0 116 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 PIGBOS1A0A0B4J2F0 54 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 ST8SIA3O43173 380 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 SSSCA1O60232 199 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 RBMXL2O75526 392 aaKnown RBP13.65□□□□□ -0.22
LMNA-216ENST00000496738 NQO2P16083 231 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 ERVK-16P61578 105 aa13.65□□□□□ -0.22
LMNA-216ENST00000496738 TRAV3A0A0B4J244 114 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 IGHV1-3A0A0C4DH29 117 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 LY6LH3BQJ8 138 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 PITX3O75364 302 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 DEDDO75618 318 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 GAPDHP04406 335 aaKnown RBP13.64□□□□□ -0.23
LMNA-216ENST00000496738 PET100P0DJ07 73 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 PKIAP61925 76 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 DNLZQ5SXM8 178 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 TPTE2P1Q5T6R2 138 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 KRTAP1-3Q8IUG1 177 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 MBD6Q96DN6 1003 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 BSCL2Q96G97 398 aaPredicted RBP13.64□□□□□ -0.23
LMNA-216ENST00000496738 TMEM140Q9NV12 185 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 POMT1Q9Y6A1 747 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 NAV2Q8IVL1 2488 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 RNF222A6NCQ9 220 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 SRRM4A7MD48 611 aaKnown RBP13.64□□□□□ -0.23
LMNA-216ENST00000496738 MIDNQ504T8 468 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 DPM3Q9P2X0 92 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 WNK2Q9Y3S1 2297 aa13.64□□□□□ -0.23
LMNA-216ENST00000496738 MSGN1A6NI15 193 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 PAX8Q06710 450 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 SPINK9Q5DT21 86 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 SPNS3Q6ZMD2 512 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 INO80EQ8NBZ0 244 aaPredicted RBP13.63□□□□□ -0.23
LMNA-216ENST00000496738 RITA1Q96K30 269 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 HARBI1Q96MB7 349 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 WASHC3Q9Y3C0 194 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 A6NJY4 79 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 B4DSR2 109 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 RAB5CP51148 216 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 LGALS4P56470 323 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 OR4A47Q6IF82 309 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 DYNAPQ8N1N2 210 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 FLYWCH2Q96CP2 140 aaKnown RBP13.63□□□□□ -0.23
LMNA-216ENST00000496738 HIF1ANQ9NWT6 349 aa13.63□□□□□ -0.23
LMNA-216ENST00000496738 A0A0D9SG52 128 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 A0A1W2PPI3 338 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 TSTD3H0UI37 97 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 AP4M1O00189 453 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 OR2F2O95006 317 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 LINC00614P0C842 121 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 SLC25A6P12236 298 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 NPBWR1P48145 328 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 ID3Q02535 119 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 OR2F1Q13607 317 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 ZNF345Q14585 488 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 CDPF1Q6NVV7 123 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 ACOT7LQ6ZUV0 252 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 QTRT1Q9BXR0 403 aaKnown RBP13.62□□□□□ -0.23
LMNA-216ENST00000496738 TIMM23O14925 209 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 CD24P25063 80 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 RPS16P62249 146 aaKnown RBP13.62□□□□□ -0.23
LMNA-216ENST00000496738 RUSC1-AS1Q66K80 236 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 PDPNQ86YL7 162 aa13.62□□□□□ -0.23
LMNA-216ENST00000496738 KCNRGQ8N5I3 272 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms