RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 HIST1H1BP16401 226 aaKnown RBP11.99□□□□□ -0.49
HDAC4-213ENST00000496347 CTRB1P17538 263 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 PSMB6P28072 239 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 CTRB2Q6GPI1 263 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 LCN12Q6JVE5 192 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 HAPLN4Q86UW8 402 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 DMBX1Q8NFW5 382 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 OR6F1Q8NGZ6 308 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 COMMD5Q9GZQ3 224 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 E7EUB6 86 aa11.98□□□□□ -0.49
HDAC4-213ENST00000496347 GPR31O00270 319 aa11.98□□□□□ -0.49
HDAC4-213ENST00000496347 FRMD6-AS1P0C7T7 363 aa11.98□□□□□ -0.49
HDAC4-213ENST00000496347 F2RP25116 425 aa11.98□□□□□ -0.49
HDAC4-213ENST00000496347 OR2B8PP59922 312 aa11.98□□□□□ -0.49
HDAC4-213ENST00000496347 CTF1Q16619 201 aa11.98□□□□□ -0.49
HDAC4-213ENST00000496347 HSD17B13Q7Z5P4 300 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-213ENST00000496347 CADM3Q8N126 398 aa11.98□□□□□ -0.49
HDAC4-213ENST00000496347 Q8N402 240 aa11.98□□□□□ -0.49
HDAC4-213ENST00000496347 OR2K2Q8NGT1 345 aa11.98□□□□□ -0.49
HDAC4-213ENST00000496347 QTRT1Q9BXR0 403 aaKnown RBP11.98□□□□□ -0.49
HDAC4-213ENST00000496347 FBXL7Q9UJT9 491 aa11.98□□□□□ -0.49
HDAC4-213ENST00000496347 IGLC7A0M8Q6 106 aa11.97□□□□□ -0.49
HDAC4-213ENST00000496347 UPK2O00526 184 aa11.97□□□□□ -0.49
HDAC4-213ENST00000496347 PGLYRP1O75594 196 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-213ENST00000496347 CSN3P07498 182 aa11.97□□□□□ -0.49
HDAC4-213ENST00000496347 HLA-DMAP28067 261 aa11.97□□□□□ -0.49
HDAC4-213ENST00000496347 S100GP29377 79 aa11.97□□□□□ -0.49
HDAC4-213ENST00000496347 MZT2AQ6P582 158 aa11.97□□□□□ -0.49
HDAC4-213ENST00000496347 SNX29P2Q8IUI4 249 aa11.97□□□□□ -0.49
HDAC4-213ENST00000496347 SGPP2Q8IWX5 399 aa11.97□□□□□ -0.49
HDAC4-213ENST00000496347 DGCR14Q96DF8 476 aaKnown RBP11.97□□□□□ -0.49
HDAC4-213ENST00000496347 CCDC140Q96MF4 163 aa11.97□□□□□ -0.49
HDAC4-213ENST00000496347 FANCD2OSQ96PS1 177 aa11.97□□□□□ -0.49
HDAC4-213ENST00000496347 FAM212BQ9NTI7 297 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-213ENST00000496347 IGLV11-55A0A075B6I3 123 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 CGB1A6NKQ9 187 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 A8MZ25 164 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 HPGDSO60760 199 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 GGCTO75223 188 aaKnown RBP11.96□□□□□ -0.49
HDAC4-213ENST00000496347 DEFA4P12838 97 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 ELK1P19419 428 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 LPCAT3Q6P1A2 487 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 C19orf35Q6ZS72 473 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 GTSCR1Q86UQ5 136 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 LYSMD2Q8IV50 215 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 LAX1Q8IWV1 398 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 EEF1AKMT3Q96AZ1 226 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 CXorf58Q96LI9 332 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 ASCL2Q99929 193 aa11.96□□□□□ -0.49
HDAC4-213ENST00000496347 MRPS26Q9BYN8 205 aaKnown RBP11.96□□□□□ -0.49
HDAC4-213ENST00000496347 TRBV7-1A0A0A6YYK4 115 aa11.95□□□□□ -0.5
HDAC4-213ENST00000496347 PPP5D1E7EU14 171 aa11.95□□□□□ -0.5
HDAC4-213ENST00000496347 LGALS9O00182 355 aa11.95□□□□□ -0.5
HDAC4-213ENST00000496347 CYB5BO43169 146 aa11.95□□□□□ -0.5
HDAC4-213ENST00000496347 TPPPO94811 219 aa11.95□□□□□ -0.5
HDAC4-213ENST00000496347 IGHV4-30-4P0DP06 118 aa11.95□□□□□ -0.5
HDAC4-213ENST00000496347 MYOD1P15172 320 aa11.95□□□□□ -0.5
HDAC4-213ENST00000496347 TSPAN5P62079 268 aa11.95□□□□□ -0.5
HDAC4-213ENST00000496347 SLC38A6Q8IZM9 456 aa11.95□□□□□ -0.5
HDAC4-213ENST00000496347 FCAMRQ8WWV6 532 aa11.95□□□□□ -0.5
HDAC4-213ENST00000496347 THAP7Q9BT49 309 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-213ENST00000496347 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 A8MWP6 167 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 FAM25AB3EWG3 89 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 FAM25CB3EWG5 89 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 FAM25GB3EWG6 89 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 REG1AP05451 166 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 ZNF182P17025 639 aaPredicted RBP11.94□□□□□ -0.5
HDAC4-213ENST00000496347 TBPP20226 339 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 ARL3P36405 182 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 GPR107Q5VW38 600 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 SBSPONQ8IVN8 264 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 Q8N1Y9 231 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 GDPD1Q8N9F7 314 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 OR1L8Q8NGR8 309 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 DYNLRB2Q8TF09 96 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 C15orf40Q8WUR7 153 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 NAA50Q9GZZ1 169 aaKnown RBP11.94□□□□□ -0.5
HDAC4-213ENST00000496347 THYN1Q9P016 225 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 DMRT1Q9Y5R6 373 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 DNAH7Q8WXX0 4024 aa11.94□□□□□ -0.5
HDAC4-213ENST00000496347 NDUFB8O95169 186 aa11.93□□□□□ -0.5
HDAC4-213ENST00000496347 UCP3P55916 312 aa11.93□□□□□ -0.5
HDAC4-213ENST00000496347 PHLDA2Q53GA4 152 aa11.93□□□□□ -0.5
HDAC4-213ENST00000496347 GPR141Q7Z602 305 aa11.93□□□□□ -0.5
HDAC4-213ENST00000496347 GPHB5Q86YW7 130 aa11.93□□□□□ -0.5
HDAC4-213ENST00000496347 OR5B3Q8NH48 314 aa11.93□□□□□ -0.5
HDAC4-213ENST00000496347 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
HDAC4-213ENST00000496347 RCHY1Q96PM5 261 aa11.93□□□□□ -0.5
HDAC4-213ENST00000496347 TSC22D3Q99576 134 aa11.93□□□□□ -0.5
HDAC4-213ENST00000496347 PRNDQ9UKY0 176 aa11.93□□□□□ -0.5
HDAC4-213ENST00000496347 MFSD2BA6NFX1 497 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 C2orf70A6NJV1 201 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 SNAPC5O75971 98 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 KRASP01116 189 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 TRAPPC2P0DI81 140 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 TRAPPC2BP0DI82 140 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 G6PCP35575 357 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 LPAR6P43657 344 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 ALDH3B2P48448 385 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms