RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.86□□□□□ -1.95
CCDC39-207ENST00000495817 MTCH2Q9Y6C9 303 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 PAPPA2Q9BXP8 1791 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 CLUHO75153 1309 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 PDE4DIPQ5VU43 2346 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 KPNA3O00505 521 aaPredicted RBP2.85□□□□□ -1.95
CCDC39-207ENST00000495817 CXCR6O00574 342 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 TFPTP0C1Z6 253 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 UCHL3P15374 230 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 AGTR1P30556 359 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 IDH3GP51553 393 aaPredicted RBP2.85□□□□□ -1.95
CCDC39-207ENST00000495817 SMCO1Q147U7 214 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 AKIRIN2Q53H80 203 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 OGFRL1Q5TC84 451 aaPredicted RBP2.85□□□□□ -1.95
CCDC39-207ENST00000495817 CD200R1LQ6Q8B3 271 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 LRP11Q86VZ4 500 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 LYPD6Q86Y78 171 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 OR6V1Q8N148 313 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 HIST1H2BAQ96A08 127 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 NIPSNAP1Q9BPW8 284 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 TMEM208Q9BTX3 173 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 CDCA4Q9BXL8 241 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 MRPS26Q9BYN8 205 aaKnown RBP2.85□□□□□ -1.95
CCDC39-207ENST00000495817 TLNRD1Q9H1K6 362 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 C11orf49Q9H6J7 331 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 SLC23A2Q9UGH3 650 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 ARL2BPQ9Y2Y0 163 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 SSC5DA1L4H1 1573 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 A0A0C4DFX4 3053 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 SCN9AQ15858 1988 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 IBTKQ9P2D0 1353 aaPredicted RBP2.85□□□□□ -1.95
CCDC39-207ENST00000495817 DDX60Q8IY21 1712 aaKnown RBP2.85□□□□□ -1.95
CCDC39-207ENST00000495817 ZNF609O15014 1411 aa2.85□□□□□ -1.95
CCDC39-207ENST00000495817 CACNA1DQ01668 2161 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 CHD5Q8TDI0 1954 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 A0A1B0GV72 72 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 B4DEV8 164 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 LECT2O14960 151 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 EEF1E1O43324 174 aaKnown RBP2.84□□□□□ -1.95
CCDC39-207ENST00000495817 IFNA16P05015 189 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 HIST1H1CP16403 213 aaKnown RBP2.84□□□□□ -1.95
CCDC39-207ENST00000495817 UGT2B7P16662 529 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 RPS12P25398 132 aaKnown RBP2.84□□□□□ -1.95
CCDC39-207ENST00000495817 PSMA1P25786 263 aaKnown RBP2.84□□□□□ -1.95
CCDC39-207ENST00000495817 CRABP1P29762 137 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 GRPRP30550 384 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 CDK9P50750 372 aaKnown RBP2.84□□□□□ -1.95
CCDC39-207ENST00000495817 KRR1Q13601 381 aaKnown RBP2.84□□□□□ -1.95
CCDC39-207ENST00000495817 APOFQ13790 326 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 LRRC26Q2I0M4 334 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 TBC1D28Q2M2D7 210 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 TMEM176BQ3YBM2 270 aaPredicted RBP2.84□□□□□ -1.95
CCDC39-207ENST00000495817 CCDC58Q4VC31 144 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 BRMS1LQ5PSV4 323 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 EBLN2Q6P2I7 272 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 XKRXQ6PP77 449 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 ZNRF2Q8NHG8 242 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 OR5P3Q8WZ94 311 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 SMIM19Q96E16 107 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 HIGD2AQ9BW72 106 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 GTSF1LQ9H1H1 148 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 SLC2A9Q9NRM0 540 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.84□□□□□ -1.95
CCDC39-207ENST00000495817 PARVAQ9NVD7 372 aa2.84□□□□□ -1.95
CCDC39-207ENST00000495817 RBBP6Q7Z6E9 1792 aaKnown RBP2.84□□□□□ -1.96
CCDC39-207ENST00000495817 MUC3AQ02505 3323 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 PRUNE2Q8WUY3 3088 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 ANKRD36CQ5JPF3 1778 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 IGKV1-12A0A0C4DH73 117 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 DAPL1A0PJW8 107 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 KCNK1O00180 336 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 PSMD12O00232 456 aaPredicted RBP2.83□□□□□ -1.96
CCDC39-207ENST00000495817 AZIN1O14977 448 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 ARPC5O15511 151 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 IGKV1D-12P01611 117 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 TYMSP04818 313 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 C8orf88P0DMB2 117 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 MAGEA12P43365 314 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 CRYBA4P53673 196 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 GABARAPL2P60520 117 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 PSPHP78330 225 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 RPL19P84098 196 aaKnown RBP2.83□□□□□ -1.96
CCDC39-207ENST00000495817 C1DQ13901 141 aaKnown RBP2.83□□□□□ -1.96
CCDC39-207ENST00000495817 SPIN4Q56A73 249 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 TRIQKQ629K1 86 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 LPCAT4Q643R3 524 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 DHRS4L2Q6PKH6 230 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 DHFR2Q86XF0 187 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 OR10X1Q8NGY0 326 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 OR51H1Q8NH63 302 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 BORCS5Q969J3 196 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 KCTD7Q96MP8 289 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 ALG5Q9Y673 324 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 NUP98P52948 1817 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 ZNF106Q9H2Y7 1883 aaKnown RBP2.83□□□□□ -1.96
CCDC39-207ENST00000495817 CDH23Q9H251 3354 aa2.83□□□□□ -1.96
CCDC39-207ENST00000495817 OTOFQ9HC10 1997 aa2.82□□□□□ -1.96
CCDC39-207ENST00000495817 TINCRA0A1B0GVN0 87 aa2.82□□□□□ -1.96
CCDC39-207ENST00000495817 SMIM9A6NGZ8 99 aa2.82□□□□□ -1.96
CCDC39-207ENST00000495817 KLRC4O43908 158 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms