RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 TMEM208Q9BTX3 173 aa1.48□□□□□ -2.17
VTA1-204ENST00000491881 MED28Q9H204 178 aa1.48□□□□□ -2.17
VTA1-204ENST00000491881 C1orf109Q9NX04 203 aa1.48□□□□□ -2.17
VTA1-204ENST00000491881 PSMD13Q9UNM6 376 aa1.48□□□□□ -2.17
VTA1-204ENST00000491881 MRPS16Q9Y3D3 137 aaKnown RBP1.48□□□□□ -2.17
VTA1-204ENST00000491881 C4AP0C0L4 1744 aa1.48□□□□□ -2.17
VTA1-204ENST00000491881 SCN7AQ01118 1682 aa1.48□□□□□ -2.17
VTA1-204ENST00000491881 MTUS2Q5JR59 1369 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 ICE1Q9Y2F5 2266 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 BCORQ6W2J9 1755 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 H3BRN7 92 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 BRI3O95415 125 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 RD3LP0DJH9 198 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 CDK2P24941 298 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 TSPEAR-AS2P59090 65 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 XRCC4Q13426 336 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 ZNHIT3Q15649 155 aaPredicted RBP1.47□□□□□ -2.17
VTA1-204ENST00000491881 SCGB1D4Q6XE38 83 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 NATD1Q8N6N6 113 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 UPK3BQ9BT76 320 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 EIF5A2Q9GZV4 153 aaKnown RBP1.47□□□□□ -2.17
VTA1-204ENST00000491881 CHMP4BQ9H444 224 aaKnown RBP1.47□□□□□ -2.17
VTA1-204ENST00000491881 UBQLN4Q9NRR5 601 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 MS4A12Q9NXJ0 267 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 GPR98Q8WXG9 6306 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 COL4A1P02462 1669 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 HMCN1Q96RW7 5635 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 ITGB4P16144 1822 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 WNK3Q9BYP7 1800 aa1.47□□□□□ -2.17
VTA1-204ENST00000491881 ACACAQ13085 2346 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 LCTP09848 1927 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 DOCK6Q96HP0 2047 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 C19orf71A6NCJ1 209 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 MKRN2OSH3BPM6 223 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 UBFD1O14562 309 aaKnown RBP1.46□□□□□ -2.18
VTA1-204ENST00000491881 HBZP02008 142 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 OR13C7P0DN81 318 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 GZMBP10144 247 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 IL9P15248 144 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 CFL1P23528 166 aaKnown RBP1.46□□□□□ -2.18
VTA1-204ENST00000491881 DAD1P61803 113 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 SLAMF1Q13291 335 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 TMED1Q13445 227 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 HES1Q14469 280 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 SS18Q15532 418 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 CCDC112Q8NEF3 446 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 STOML3Q8TAV4 291 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 ACY3Q96HD9 319 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 METTL9Q9H1A3 318 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 CXCL16Q9H2A7 254 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 SNX12Q9UMY4 172 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 DLEC1Q9Y238 1755 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 UBR3Q6ZT12 1888 aa1.46□□□□□ -2.18
VTA1-204ENST00000491881 APC2O95996 2303 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 CLUHO75153 1309 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 MUC21A0A0G2JKD1 596 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 MUC21A0A140T8X8 626 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 DAPL1A0PJW8 107 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 GRIFINA4D1Z8 144 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 TRPC5OSA6NMA1 111 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 H3BPC8 53 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 SMLR1H3BR10 107 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 ZW10O43264 779 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 NPPAP01160 153 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 FGF12P61328 243 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 PRDX4Q13162 271 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 PMS2P3Q13401 168 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 DNAL1Q4LDG9 190 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 FAM45BPQ6NSW5 357 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 PLCZ1Q86YW0 608 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 BOD1L2Q8IYS8 172 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 OR52E4Q8NGH9 312 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 OR4X1Q8NH49 305 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 FNDC9Q8TBE3 224 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 MRPS24Q96EL2 167 aaKnown RBP1.45□□□□□ -2.18
VTA1-204ENST00000491881 OR52B2Q96RD2 323 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 TBX5Q99593 518 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 NDEL1Q9GZM8 345 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 C11orf1Q9H5F2 150 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 C16orf95Q9H693 158 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 NDUFB11Q9NX14 153 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 HHLA2Q9UM44 414 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 C4BP0C0L5 1744 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 FANCMQ8IYD8 2048 aa1.45□□□□□ -2.18
VTA1-204ENST00000491881 LRRC37AA6NMS7 1700 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 IFT172Q9UG01 1749 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 ATP6V1G2O95670 118 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 CD7P09564 240 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 PET100P0DJ07 73 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 ALOX5APP20292 161 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 NPPCP23582 126 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 CRHBPP24387 322 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 GRPRP30550 384 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 OPRM1P35372 400 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 HSPA9P38646 679 aaKnown RBP1.44□□□□□ -2.18
VTA1-204ENST00000491881 HINT1P49773 126 aaPredicted RBP1.44□□□□□ -2.18
VTA1-204ENST00000491881 LINC00313P59037 77 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 TAS2R45P59539 299 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 KRTAP13-4Q3LI77 160 aa1.44□□□□□ -2.18
VTA1-204ENST00000491881 SPATA31B1PQ5VZV4 182 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms