RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 FBP1P09467 338 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 P0C879 139 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 MED14OSP0DP75 135 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 IL3RAP26951 378 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 PSMB6P28072 239 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 REG1BP48304 166 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 RPL15P61313 204 aaKnown RBP6.05□□□□□ -1.44
CLDN1-202ENST00000490800 IZUMO4Q1ZYL8 232 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 LDLRAD2Q5SZI1 272 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 LAMTOR1Q6IAA8 161 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 Q6ZRM9 215 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 Q6ZSV7 163 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 FAM219AQ8IW50 185 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 OR4D5Q8NGN0 318 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 GRPEL2Q8TAA5 225 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 CD300LFQ8TDQ1 290 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 HYLS1Q96M11 299 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 SPIN2AQ99865 258 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 CITED1Q99966 193 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 SPIN2BQ9BPZ2 258 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 NABP2Q9BQ15 211 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 HEXA-AS1Q9H8Q6 139 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 GSKIPQ9P0R6 139 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 PRELID3BQ9Y3B1 194 aa6.05□□□□□ -1.44
CLDN1-202ENST00000490800 A0A1B0GU03 582 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 H0YJW9 148 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 PITX3O75364 302 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 HPRT1P00492 218 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 KRASP01116 189 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 ARG1P05089 322 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 SLC25A4P12235 298 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 SLC25A6P12236 298 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 G6PCP35575 357 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 UBE2E1P51965 193 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 AKR1C2P52895 323 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 PROK1P58294 105 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 FGL1Q08830 312 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 RAB32Q13637 225 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 LRRC37A5PQ49AS3 106 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 C11orf87Q6NUJ2 197 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 TGIF2LXQ8IUE1 241 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 C9orf62Q8N4C0 152 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 NUDT10Q8NFP7 164 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 OR4S2Q8NH73 311 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 RNASE11Q8TAA1 199 aaKnown RBP6.04□□□□□ -1.44
CLDN1-202ENST00000490800 C17orf50Q8WW18 174 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 R3HDM4Q96D70 268 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 RBMXL1Q96E39 390 aaKnown RBP6.04□□□□□ -1.44
CLDN1-202ENST00000490800 RRNAD1Q96FB5 475 aaKnown RBP6.04□□□□□ -1.44
CLDN1-202ENST00000490800 NUDT11Q96G61 164 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 RNF126Q9BV68 326 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 PLEKHA2Q9HB19 425 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 SLC35D1Q9NTN3 355 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 COMMD9Q9P000 198 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 CACNG5Q9UF02 275 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 AMMECR1Q9Y4X0 333 aaPredicted RBP6.04□□□□□ -1.44
CLDN1-202ENST00000490800 CMYA5Q8N3K9 4069 aa6.04□□□□□ -1.44
CLDN1-202ENST00000490800 FXYD6-FXYD2A0A087WZ82 144 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 BTBD17A6NE02 478 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 HMSDA8MTL9 139 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 K7EPK0 472 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 TIMM23O14925 209 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 TSPAN9O75954 239 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 ATG12O94817 140 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 CRYZL1O95825 349 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 APOA2P02652 100 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 MBPP02686 304 aaPredicted RBP6.03□□□□□ -1.44
CLDN1-202ENST00000490800 GAPDHP04406 335 aaKnown RBP6.03□□□□□ -1.44
CLDN1-202ENST00000490800 IGKV1-16P04430 117 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 RRASP10301 218 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 LYL1P12980 280 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 CXCL2P19875 107 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 PAX6P26367 422 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 HTR1DP28221 377 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 SAA4P35542 130 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 S100A10P60903 97 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 SMCO1Q147U7 214 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 RTL8BQ17RB0 113 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 LGALSLQ3ZCW2 172 aaPredicted RBP6.03□□□□□ -1.44
CLDN1-202ENST00000490800 MIDNQ504T8 468 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 PDLIM3Q53GG5 364 aaPredicted RBP6.03□□□□□ -1.44
CLDN1-202ENST00000490800 CXorf66Q5JRM2 361 aaPredicted RBP6.03□□□□□ -1.44
CLDN1-202ENST00000490800 TPTE2P1Q5T6R2 138 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 THOC7Q6I9Y2 204 aaKnown RBP6.03□□□□□ -1.44
CLDN1-202ENST00000490800 DHRS7BQ6IAN0 325 aaPredicted RBP6.03□□□□□ -1.44
CLDN1-202ENST00000490800 PRSS54Q6PEW0 395 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 TMEM65Q6PI78 240 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 FAM71E2Q8N5Q1 922 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 OR1S1Q8NH92 325 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 AJUBAQ96IF1 538 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 SPATA25Q9BR10 227 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 C16orf95Q9H693 158 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 PLSCR3Q9NRY6 295 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 OR5AC2Q9NZP5 309 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 DPM3Q9P2X0 92 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 MBD2Q9UBB5 411 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 VPREB3Q9UKI3 123 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 LSM5Q9Y4Y9 91 aaKnown RBP6.03□□□□□ -1.44
CLDN1-202ENST00000490800 TNCP24821 2201 aa6.03□□□□□ -1.44
CLDN1-202ENST00000490800 IGHV1-3A0A0C4DH29 117 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms