RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 I3L521 148 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 CRPP02741 224 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 LYNX1P0DP58 116 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 UCHL3P15374 230 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 S100A7P31151 101 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 MAP2K4P45985 399 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 EMX1Q04741 257 aaPredicted RBP1.16□□□□□ -2.22
CD46-216ENST00000490278 NNATQ16517 81 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 C7orf65Q6ZTY9 151 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 MBD3L1Q8WWY6 194 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 TESCQ96BS2 214 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 ROPN1LQ96C74 230 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 RSL24D1Q9UHA3 163 aaKnown RBP1.16□□□□□ -2.22
CD46-216ENST00000490278 ANGPT4Q9Y264 503 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 SCAF11Q99590 1463 aaKnown RBP1.16□□□□□ -2.22
CD46-216ENST00000490278 NUMA1Q14980 2115 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 SDK1Q7Z5N4 2213 aa1.16□□□□□ -2.22
CD46-216ENST00000490278 MEIS3P1A6NDR6 274 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 OR51F1A6NGY5 319 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 EVPLLA8MZ36 301 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 ORC5O43913 435 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 RPS12P25398 132 aaKnown RBP1.15□□□□□ -2.23
CD46-216ENST00000490278 MARCKSL1P49006 195 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 OR4D2P58180 307 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 NAA20P61599 178 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 CAV1Q03135 178 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 COTL1Q14019 142 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 MOGQ16653 247 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 FP248Q71RG6 208 aaPredicted RBP1.15□□□□□ -2.23
CD46-216ENST00000490278 DEFB125Q8N687 156 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 ZNF676Q8N7Q3 588 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 OR1M1Q8NGA1 313 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 ANKRD7Q92527 254 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 EIF4G1Q04637 1599 aaKnown RBP1.15□□□□□ -2.23
CD46-216ENST00000490278 PTPRBP23467 1997 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 RTTNQ86VV8 2226 aa1.15□□□□□ -2.23
CD46-216ENST00000490278 MALRD1Q5VYJ5 2156 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 SRP19P09132 144 aaKnown RBP1.14□□□□□ -2.23
CD46-216ENST00000490278 TRGC1P0CF51 173 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 KCNE1P15382 129 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 HLA-DMBP28068 263 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 CCR7P32248 378 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 ARHGAP11BQ3KRB8 267 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 FAM27BQ5VT28 67 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 CD200R1LQ6Q8B3 271 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 GID4Q8IVV7 300 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 C10orf105Q8TEF2 133 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 ERMAPQ96PL5 475 aaPredicted RBP1.14□□□□□ -2.23
CD46-216ENST00000490278 OR8D2Q9GZM6 311 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 FAM96AQ9H5X1 160 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 PAQR5Q9NXK6 330 aaPredicted RBP1.14□□□□□ -2.23
CD46-216ENST00000490278 CCDC88CQ9P219 2028 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 PTPRSQ13332 1948 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 CUL9Q8IWT3 2517 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 CPAMD8Q8IZJ3 1885 aa1.14□□□□□ -2.23
CD46-216ENST00000490278 MED13Q9UHV7 2174 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 TRAPPC13A5PLN9 417 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 ACOX3O15254 700 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 ISG15P05161 165 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 RPSAP08865 295 aaKnown RBP1.13□□□□□ -2.23
CD46-216ENST00000490278 FAM228BP0C875 321 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 SULT1A3P0DMM9 295 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 SULT1A4P0DMN0 295 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 FGF6P10767 208 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 EVX1P49640 407 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 AP2S1P53680 142 aaPredicted RBP1.13□□□□□ -2.23
CD46-216ENST00000490278 ELOBQ15370 118 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 Q1T7F1 81 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 GLT8D1Q68CQ7 371 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 FAM173BQ6P4H8 233 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 RPS19BP1Q86WX3 136 aaKnown RBP1.13□□□□□ -2.23
CD46-216ENST00000490278 RETNLBQ9BQ08 111 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 FUT9Q9Y231 359 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 LAMB2P55268 1798 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 C9orf84Q5VXU9 1444 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 EVC2Q86UK5 1308 aa1.13□□□□□ -2.23
CD46-216ENST00000490278 IGKV2-40A0A087WW87 121 aaPredicted RBP1.12□□□□□ -2.23
CD46-216ENST00000490278 IGKV3D-7A0A0C4DH55 119 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 IGKV3OR2-268A0A0C4DH90 116 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 TRBV10-2A0A0K0K1G8 114 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 TRAPPC2LH3BP13 241 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 SLC22A1O15245 554 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 MRPS14O60783 128 aaKnown RBP1.12□□□□□ -2.23
CD46-216ENST00000490278 NOS1APO75052 506 aaPredicted RBP1.12□□□□□ -2.23
CD46-216ENST00000490278 IGKV2D-40P01614 121 aaPredicted RBP1.12□□□□□ -2.23
CD46-216ENST00000490278 IGHV3-7P01780 117 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 C1QAP02745 245 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 COQ5Q5HYK3 327 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 SFXN4Q6P4A7 337 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 UNQ6190/PRO20217Q6UXQ8 127 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 C10orf67Q8IYJ2 551 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 C9orf163Q8N9P6 203 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 GPR32P1Q8NGA4 272 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 CNBD2Q96M20 576 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 OR51I1Q9H343 314 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 SOX21Q9Y651 276 aaPredicted RBP1.12□□□□□ -2.23
CD46-216ENST00000490278 DCCP43146 1447 aa1.12□□□□□ -2.23
CD46-216ENST00000490278 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
CD46-216ENST00000490278 SMARCA4P51532 1647 aa1.11□□□□□ -2.23
CD46-216ENST00000490278 ZFHX2Q9C0A1 2572 aaPredicted RBP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms