RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 SLC24A4Q8NFF2 622 aa12.27□□□□□ -0.44
COL9A1-208ENST00000489611 NANPQ8TBE9 248 aa12.27□□□□□ -0.44
COL9A1-208ENST00000489611 ZNF714Q96N38 554 aa12.27□□□□□ -0.44
COL9A1-208ENST00000489611 BET1LQ9NYM9 111 aa12.27□□□□□ -0.44
COL9A1-208ENST00000489611 PLCE1Q9P212 2302 aa12.27□□□□□ -0.45
COL9A1-208ENST00000489611 APOA2P02652 100 aa12.27□□□□□ -0.45
COL9A1-208ENST00000489611 SNRPEP62304 92 aaKnown RBP12.27□□□□□ -0.45
COL9A1-208ENST00000489611 LRRC10Q5BKY1 277 aa12.27□□□□□ -0.45
COL9A1-208ENST00000489611 VKORC1L1Q8N0U8 176 aa12.27□□□□□ -0.45
COL9A1-208ENST00000489611 Q8N7P7 452 aa12.27□□□□□ -0.45
COL9A1-208ENST00000489611 OR5B3Q8NH48 314 aa12.27□□□□□ -0.45
COL9A1-208ENST00000489611 SLC35D1Q9NTN3 355 aa12.27□□□□□ -0.45
COL9A1-208ENST00000489611 KAAG1Q9UBP8 84 aa12.27□□□□□ -0.45
COL9A1-208ENST00000489611 ZGRF1Q86YA3 2104 aa12.26□□□□□ -0.45
COL9A1-208ENST00000489611 RRHO14718 337 aa12.26□□□□□ -0.45
COL9A1-208ENST00000489611 NDUFB3O43676 98 aa12.26□□□□□ -0.45
COL9A1-208ENST00000489611 IGHV2-5P01817 119 aa12.26□□□□□ -0.45
COL9A1-208ENST00000489611 RPL35P42766 123 aaKnown RBP12.26□□□□□ -0.45
COL9A1-208ENST00000489611 RPS10P46783 165 aaKnown RBP12.26□□□□□ -0.45
COL9A1-208ENST00000489611 CASP6P55212 293 aa12.26□□□□□ -0.45
COL9A1-208ENST00000489611 TEPPQ6URK8 271 aa12.26□□□□□ -0.45
COL9A1-208ENST00000489611 RNASE6Q93091 150 aaKnown RBP12.26□□□□□ -0.45
COL9A1-208ENST00000489611 LEAP2Q969E1 77 aa12.26□□□□□ -0.45
COL9A1-208ENST00000489611 LSM4Q9Y4Z0 139 aaKnown RBP12.26□□□□□ -0.45
COL9A1-208ENST00000489611 ZNF98A6NK75 572 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 AP4M1O00189 453 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 IGHV3-7P01780 117 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 SFTPCP11686 197 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 PRCDQ00LT1 54 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 EFNB3Q15768 340 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 NCMAPQ5T1S8 102 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 DUX4L9Q6RFH8 374 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-208ENST00000489611 C1orf229Q6ZS94 237 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-208ENST00000489611 LINC00311Q8N616 119 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 Q8WTZ3 238 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 PLEKHA3Q9HB20 300 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 TMEM106BQ9NUM4 274 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 OR51B2Q9Y5P1 312 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 TRBV24-1A0A075B6N3 115 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 TRAV3A0A0B4J244 114 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 F6UZH7 168 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 UPK2O00526 184 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 CT45A6P0DMU7 189 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 CT45A5P0DMU8 189 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 CT45A7P0DMV0 189 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 GNG10P50151 68 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 HNF4GQ14541 408 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 OR4A5Q8NH83 315 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 ZNF596Q8TC21 504 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 TMEM186Q96B77 213 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 ATRXP46100 2492 aa12.25□□□□□ -0.45
COL9A1-208ENST00000489611 A0A1W2PPE3 182 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 J3QR06 171 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 TNFRSF13BO14836 293 aaPredicted RBP12.24□□□□□ -0.45
COL9A1-208ENST00000489611 FSTL3O95633 263 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 CXorf1O96002 111 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 S100A9P06702 114 aaKnown RBP12.24□□□□□ -0.45
COL9A1-208ENST00000489611 SMIM6P0DI80 62 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 RPL29P47914 159 aaKnown RBP12.24□□□□□ -0.45
COL9A1-208ENST00000489611 BSXQ3C1V8 233 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 ABHD12Q8N2K0 398 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 ST6GALNAC3Q8NDV1 305 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 OR4F5Q8NH21 305 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 VSTM2AQ8TAG5 236 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 ANAPC16Q96DE5 110 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 OR4F4Q96R69 305 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 TMEM204Q9BSN7 226 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 GGTLC1Q9BX51 225 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 DYNLRB1Q9NP97 96 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 PXMP4Q9Y6I8 212 aa12.24□□□□□ -0.45
COL9A1-208ENST00000489611 B9A039 149 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 INS-IGF2F8WCM5 200 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 MT-CO2P00403 227 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 APOBEC3AP31941 199 aaPredicted RBP12.23□□□□□ -0.45
COL9A1-208ENST00000489611 ERVFRD-1P60508 538 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 WFIKKN1Q96NZ8 548 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 MGST2Q99735 147 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 PARLQ9H300 379 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 C11orf94C9JXX5 98 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 PAGE4O60829 102 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 STAG3L2P0CL84 134 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 MEOX2P50222 304 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 RHOBP62745 196 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 TMEM177Q53S58 311 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 OR5AN1Q8NGI8 311 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 BTF3L4Q96K17 158 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 C12orf57Q99622 126 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 PCGF1Q9BSM1 259 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 C19orf24Q9BVV8 132 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 TMPRSS5Q9H3S3 457 aa12.23□□□□□ -0.45
COL9A1-208ENST00000489611 SPTA1P02549 2419 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 TET2Q6N021 2002 aaPredicted RBP12.22□□□□□ -0.45
COL9A1-208ENST00000489611 RP1L1Q8IWN7 2480 aaPredicted RBP12.22□□□□□ -0.45
COL9A1-208ENST00000489611 A0A087X0M5 115 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 A0A1B0GX30 115 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 SHISA9B4DS77 424 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 CA2P00918 260 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 CD99P14209 185 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 S100PP25815 95 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms