RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-231	ENST00000488905	MSMO1	Q15800	293 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	OR4A47	Q6IF82	309 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	SFXN4	Q6P4A7	337 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	BTNL8	Q6UX41	500 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	UXS1	Q8NBZ7	420 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	OR52B4	Q8NGK2	314 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	OR4A5	Q8NH83	315 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	SECTM1	Q8WVN6	248 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	GGTLC1	Q9BX51	225 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	TRBV7-1	A0A0A6YYK4	115 aa		13.79	□□□□□ -0.2
HDAC6-231	ENST00000488905	MRPS14	O60783	128 aa	Known RBP	13.79	□□□□□ -0.2
HDAC6-231	ENST00000488905	SCAF4	O95104	1147 aa	Known RBP	13.79	□□□□□ -0.2
HDAC6-231	ENST00000488905	TPRA1	Q86W33	373 aa		13.79	□□□□□ -0.2
HDAC6-231	ENST00000488905	BEST4	Q8NFU0	473 aa		13.79	□□□□□ -0.2
HDAC6-231	ENST00000488905	OR13F1	Q8NGS4	319 aa		13.79	□□□□□ -0.2
HDAC6-231	ENST00000488905	CXorf58	Q96LI9	332 aa		13.79	□□□□□ -0.2
HDAC6-231	ENST00000488905	CCL28	Q9NRJ3	127 aa		13.79	□□□□□ -0.2
HDAC6-231	ENST00000488905	RRP15	Q9Y3B9	282 aa	Known RBP	13.79	□□□□□ -0.2
HDAC6-231	ENST00000488905	FCGR2C	P31995	323 aa		13.78	□□□□□ -0.2
HDAC6-231	ENST00000488905	UNQ9165/PRO28630	Q6UXU0	137 aa		13.78	□□□□□ -0.2
HDAC6-231	ENST00000488905	SPAG16	Q8N0X2	631 aa		13.78	□□□□□ -0.2
HDAC6-231	ENST00000488905	HRASLS	Q9HDD0	168 aa		13.78	□□□□□ -0.2
HDAC6-231	ENST00000488905	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	IGLC7	A0M8Q6	106 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	PPY	P01298	95 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	PTHLH	P12272	177 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	GPR183	P32249	361 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	OR2B8P	P59922	312 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	ANKRD55	Q3KP44	614 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	TM4SF20	Q53R12	229 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	GVQW1	Q8N7I0	195 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	FCGR1B	Q92637	280 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	MARC2	Q969Z3	335 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	AIFM2	Q9BRQ8	373 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	RAB26	Q9ULW5	256 aa		13.77	□□□□□ -0.21
HDAC6-231	ENST00000488905	CLEC3B	P05452	202 aa		13.76	□□□□□ -0.21
HDAC6-231	ENST00000488905	TAS2R31	P59538	309 aa		13.76	□□□□□ -0.21
HDAC6-231	ENST00000488905	CATR1	Q13166	79 aa		13.76	□□□□□ -0.21
HDAC6-231	ENST00000488905	SPART	Q8N0X7	666 aa		13.76	□□□□□ -0.21
HDAC6-231	ENST00000488905	ZBTB34	Q8NCN2	500 aa		13.76	□□□□□ -0.21
HDAC6-231	ENST00000488905	ZNF502	Q8TBZ5	544 aa		13.76	□□□□□ -0.21
HDAC6-231	ENST00000488905	SLC25A38	Q96DW6	304 aa		13.76	□□□□□ -0.21
HDAC6-231	ENST00000488905	OVOL2	Q9BRP0	275 aa		13.76	□□□□□ -0.21
HDAC6-231	ENST00000488905	SSR3	Q9UNL2	185 aa		13.76	□□□□□ -0.21
HDAC6-231	ENST00000488905	TRAV25	A0A0B4J276	109 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	SULT1C2	O00338	296 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	C8orf88	P0DMB2	117 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	NQO2	P16083	231 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	SDC2	P34741	201 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	SCAND1	P57086	179 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	POU2AF1	Q16633	256 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	HOGA1	Q86XE5	327 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	OR1L6	Q8NGR2	347 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	SRSF8	Q9BRL6	282 aa	Known RBP	13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	SLC5A7	Q9GZV3	580 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	ETV7	Q9Y603	341 aa		13.75	□□□□□ -0.21
HDAC6-231	ENST00000488905	TRAV18	A0A075B6X5	111 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	TRAV3	A0A0B4J244	114 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	IGHV3-35	A0A0C4DH35	117 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	UPK2	O00526	184 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	HPRT1	P00492	218 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	FGF2	P09038	288 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	ELL	P55199	621 aa	Predicted RBP	13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	FXYD4	P59646	89 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	ZNF585B	Q52M93	769 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	OR5H6	Q8NGV6	325 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	QTRT1	Q9BXR0	403 aa	Known RBP	13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	COMMD5	Q9GZQ3	224 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	TMEM140	Q9NV12	185 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	THYN1	Q9P016	225 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	MRPL27	Q9P0M9	148 aa	Known RBP	13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905	UFC1	Q9Y3C8	167 aa		13.74	□□□□□ -0.21
HDAC6-231	ENST00000488905		A0A0A6YYH2	397 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905		A6NJ64	397 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	CLEC2L	P0C7M8	214 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	PTBP1	P26599	531 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	MXD1	Q05195	221 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	ZNF773	Q6PK81	442 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	PLET1	Q6UQ28	207 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	ZNF818P	Q6ZRF7	136 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	TMEM17	Q86X19	198 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	OR51H1	Q8NH63	302 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	TMEM190	Q8WZ59	177 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	LINC00476	Q8WZB0	136 aa		13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.73	□□□□□ -0.21
HDAC6-231	ENST00000488905	TGOLN2	O43493	480 aa		13.72	□□□□□ -0.21
HDAC6-231	ENST00000488905	S1PR2	O95136	353 aa		13.72	□□□□□ -0.21
HDAC6-231	ENST00000488905	THOC7	Q6I9Y2	204 aa	Known RBP	13.72	□□□□□ -0.21
HDAC6-231	ENST00000488905	GDPD1	Q8N9F7	314 aa		13.72	□□□□□ -0.21
HDAC6-231	ENST00000488905	DMBX1	Q8NFW5	382 aa		13.72	□□□□□ -0.21
HDAC6-231	ENST00000488905	SPAG8	Q99932	426 aa	Predicted RBP	13.72	□□□□□ -0.21
HDAC6-231	ENST00000488905	PLEKHA2	Q9HB19	425 aa		13.72	□□□□□ -0.21
HDAC6-231	ENST00000488905	COMMD9	Q9P000	198 aa		13.72	□□□□□ -0.21
HDAC6-231	ENST00000488905	CYB5B	O43169	146 aa		13.71	□□□□□ -0.21
HDAC6-231	ENST00000488905	FCER2	P06734	321 aa		13.71	□□□□□ -0.21
HDAC6-231	ENST00000488905	PMS2P11	Q13670	270 aa		13.71	□□□□□ -0.21
HDAC6-231	ENST00000488905	IDNK	Q5T6J7	187 aa		13.71	□□□□□ -0.21
HDAC6-231	ENST00000488905	AADACL3	Q5VUY0	350 aa		13.71	□□□□□ -0.21

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