RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 AWAT1Q58HT5 328 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 C9orf152Q5JTZ5 239 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 FAM219AQ8IW50 185 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 OR4A16Q8NH70 328 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 OR10C1Q96KK4 312 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 QTRT1Q9BXR0 403 aaKnown RBP10.1□□□□□ -0.79
HDAC6-229ENST00000486665 CACNG5Q9UF02 275 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 TMED3Q9Y3Q3 217 aa10.1□□□□□ -0.79
HDAC6-229ENST00000486665 TEX50A0A1B0GTY4 177 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 SNAPC5O75971 98 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 SIX6O95475 246 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 IFNA21P01568 189 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 OPN1MWP04001 364 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 OPN1MW2P0DN77 364 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 OPN1MW3P0DN78 364 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 EGR2P11161 476 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-229ENST00000486665 HLA-GP17693 338 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 RPL8P62917 257 aaKnown RBP10.09□□□□□ -0.79
HDAC6-229ENST00000486665 NDPQ00604 133 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 FCN2Q15485 313 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 C10orf55Q5SWW7 151 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 ZNF562Q6V9R5 426 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 MMD2Q8IY49 270 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
HDAC6-229ENST00000486665 PIGBOS1A0A0B4J2F0 54 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 A0A1B0GU03 582 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 A0A1B0GVG6 124 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 C13orf42A0A1B0GVH6 325 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 A0A1B0GW64 132 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 CGB1A6NKQ9 187 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 C15orf61A6NNL5 157 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 FAM25EA8MYX2 175 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 TRIM77I1YAP6 450 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 GOSR2O14653 212 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 PITX3O75364 302 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 SULT1A3P0DMM9 295 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 SULT1A4P0DMN0 295 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 SMCO1Q147U7 214 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 FXYD3Q14802 87 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 TNXAQ16473 311 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 Q6ZSV7 163 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 SGMS2Q8NHU3 365 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 WDR89Q96FK6 387 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-229ENST00000486665 PRSS22Q9GZN4 317 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 NPFFR1Q9GZQ6 430 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-229ENST00000486665 TMEM14BQ9NUH8 114 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 PRNDQ9UKY0 176 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 FOXA2Q9Y261 457 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-229ENST00000486665 FBXO7Q9Y3I1 522 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 OR51B2Q9Y5P1 312 aa10.08□□□□□ -0.8
HDAC6-229ENST00000486665 PRKDCP78527 4128 aaKnown RBP10.08□□□□□ -0.8
HDAC6-229ENST00000486665 C5orf51A6NDU8 294 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 ST8SIA3O43173 380 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 NXPH3O95157 252 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 CNIH1O95406 144 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 IGHG2P01859 326 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 SLC25A6P12236 298 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 CXCL3P19876 107 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 MAS1LP35410 378 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 TMEM95Q3KNT9 176 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 CXorf66Q5JRM2 361 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-229ENST00000486665 FOXRED2Q8IWF2 684 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 FAM103A1Q9BTL3 118 aaKnown RBP10.07□□□□□ -0.8
HDAC6-229ENST00000486665 MED28Q9H204 178 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 MGAT4CQ9UBM8 478 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
HDAC6-229ENST00000486665 VWFP04275 2813 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 HMX3A6NHT5 357 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 MSGN1A6NI15 193 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 RBMXL2O75526 392 aaKnown RBP10.06□□□□□ -0.8
HDAC6-229ENST00000486665 TSPAN9O75954 239 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 ACTL6BO94805 426 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 CRYBA1P05813 215 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 FGF2P09038 288 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 RPL27AP46776 148 aaKnown RBP10.06□□□□□ -0.8
HDAC6-229ENST00000486665 H2BFSP57053 126 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 HSPE1P61604 102 aaKnown RBP10.06□□□□□ -0.8
HDAC6-229ENST00000486665 RRAS2P62070 204 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-229ENST00000486665 IAH1Q2TAA2 248 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-229ENST00000486665 AARDQ4LEZ3 155 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 SPINK9Q5DT21 86 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 GSG1LQ6UXU4 331 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 SLC35E3Q7Z769 313 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 ZNF429Q86V71 674 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 Q8N2B8 174 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 ZBTB8BQ8NAP8 495 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-229ENST00000486665 OR11H7Q8NGC8 314 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 OR4D5Q8NGN0 318 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 OR5M8Q8NGP6 311 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 OR1L8Q8NGR8 309 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 OR1S1Q8NH92 325 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 GRPEL2Q8TAA5 225 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 SRSF12Q8WXF0 261 aaKnown RBP10.06□□□□□ -0.8
HDAC6-229ENST00000486665 C2orf50Q96LR7 162 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 FYTTD1Q96QD9 318 aaKnown RBP10.06□□□□□ -0.8
HDAC6-229ENST00000486665 COMMD5Q9GZQ3 224 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 PARP11Q9NR21 331 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 NDUFA4L2Q9NRX3 87 aa10.06□□□□□ -0.8
HDAC6-229ENST00000486665 COA4Q9NYJ1 87 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms