RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 SAA1P0DJI8 122 aaPredicted RBP6.96□□□□□ -1.3
COL8A1-207ENST00000483969 EGR2P11161 476 aaPredicted RBP6.96□□□□□ -1.3
COL8A1-207ENST00000483969 NQO2P16083 231 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 MAS1LP35410 378 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 CDX1P47902 265 aaPredicted RBP6.96□□□□□ -1.3
COL8A1-207ENST00000483969 BRWD1-AS2P59051 145 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 AP3S2P59780 193 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 RPL23AP62750 156 aaKnown RBP6.96□□□□□ -1.3
COL8A1-207ENST00000483969 PJVKQ0ZLH3 352 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 TNXAQ16473 311 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 ECSCRQ19T08 205 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 SCGB2B2Q4G0G5 96 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 KIAA2026Q5HYC2 2103 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 HIST2H2BDQ6DRA6 164 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 CCDC190Q86UF4 302 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 LHFPL1Q86WI0 220 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 ZNF695Q8IW36 515 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 RNF152Q8N8N0 203 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 LFNGQ8NES3 379 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 OR6Q1Q8NGQ2 317 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 OR4A5Q8NH83 315 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 GRPEL2Q8TAA5 225 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 TMEM167AQ8TBQ9 72 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 SCGB3A2Q96PL1 93 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 PHB2Q99623 299 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 FXYD6Q9H0Q3 95 aa6.96□□□□□ -1.3
COL8A1-207ENST00000483969 FAM212BQ9NTI7 297 aaPredicted RBP6.96□□□□□ -1.3
COL8A1-207ENST00000483969 FOXA2Q9Y261 457 aaPredicted RBP6.96□□□□□ -1.3
COL8A1-207ENST00000483969 A0A1W2PN81 502 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 MSGN1A6NI15 193 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 ARPC1BO15143 372 aaKnown RBP6.95□□□□□ -1.3
COL8A1-207ENST00000483969 MPPED1O15442 326 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 RAMP3O60896 148 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 RLN1P04808 185 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 PSMB8P28062 276 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 FAUP35544 74 aaKnown RBP6.95□□□□□ -1.3
COL8A1-207ENST00000483969 CHRNA7P36544 502 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 ETV6P41212 452 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 LPAR6P43657 344 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 RAB9AP51151 201 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 ERVK-16P61578 105 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 RND3P61587 244 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 POU2AF1Q16633 256 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 PHLDA2Q53GA4 152 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 IDO2Q6ZQW0 420 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 TBC1D26Q86UD7 250 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 VKORC1L1Q8N0U8 176 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 PUSL1Q8N0Z8 303 aaKnown RBP6.95□□□□□ -1.3
COL8A1-207ENST00000483969 Q8N402 240 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 CCDC71LQ8N9Z2 235 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 DMBX1Q8NFW5 382 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 UBE2E2Q96LR5 201 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 SPIN2AQ99865 258 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 PRRT1Q99946 306 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 SPIN2BQ9BPZ2 258 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 FAM103A1Q9BTL3 118 aaKnown RBP6.95□□□□□ -1.3
COL8A1-207ENST00000483969 SLA2Q9H6Q3 261 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 ZNF430Q9H8G1 570 aaPredicted RBP6.95□□□□□ -1.3
COL8A1-207ENST00000483969 HRASLSQ9HDD0 168 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 BET1LQ9NYM9 111 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 COMMD9Q9P000 198 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 COPZ2Q9P299 210 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 SCP2D1Q9UJQ7 156 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 FBXO7Q9Y3I1 522 aa6.95□□□□□ -1.3
COL8A1-207ENST00000483969 H3BUA1 57 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 B3GALNT1O75752 331 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 ATG12O94817 140 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 KBTBD11O94819 623 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 SERPINE2P07093 398 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 CTSDP07339 412 aaPredicted RBP6.94□□□□□ -1.3
COL8A1-207ENST00000483969 ZNF735P0CB33 412 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 MYCNOSP40205 109 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 RPL8P62917 257 aaKnown RBP6.94□□□□□ -1.3
COL8A1-207ENST00000483969 NDPQ00604 133 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 SURF2Q15527 256 aaPredicted RBP6.94□□□□□ -1.3
COL8A1-207ENST00000483969 C19orf54Q5BKX5 351 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 OR4A47Q6IF82 309 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 SSX9Q7RTT3 188 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 SLC25A42Q86VD7 318 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 CADM3Q8N126 398 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 TOMM5Q8N4H5 51 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 ZNF491Q8N8L2 437 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 GDPD1Q8N9F7 314 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 KLHL30-AS1Q8NEE0 82 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 OR5T1Q8NG75 326 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 OR4D10Q8NGI6 311 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 SRSF12Q8WXF0 261 aaKnown RBP6.94□□□□□ -1.3
COL8A1-207ENST00000483969 DEDD2Q8WXF8 326 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 KLK15Q9H2R5 256 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 SLC2A9Q9NRM0 540 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 ZNF355PQ9NSJ1 428 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 MCUBQ9NWR8 336 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 C14orf166Q9Y224 244 aaKnown RBP6.94□□□□□ -1.3
COL8A1-207ENST00000483969 VSIG4Q9Y279 399 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 V9GYH0 126 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 DNHD1Q96M86 4753 aa6.94□□□□□ -1.3
COL8A1-207ENST00000483969 A0A0G2JLM5 398 aa6.93□□□□□ -1.3
COL8A1-207ENST00000483969 UPK2O00526 184 aa6.93□□□□□ -1.3
COL8A1-207ENST00000483969 SNAPC5O75971 98 aa6.93□□□□□ -1.3
COL8A1-207ENST00000483969 S1PR2O95136 353 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms