RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 GPX1P07203 203 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 OR2M7Q8NG81 312 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 LRFN3Q9BTN0 628 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 WASHC3Q9Y3C0 194 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 ABCA1O95477 2261 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 PIGBOS1A0A0B4J2F0 54 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 TOX4O94842 621 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 ARR3P36575 388 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 RELBQ01201 579 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 OR1C1Q15619 314 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 TMEM144Q7Z5S9 345 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 GNB4Q9HAV0 340 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 TRAPPC2LQ9UL33 140 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 MPC1Q9Y5U8 109 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 CFAP47Q6ZTR5 3102 aa10.39□□□□□ -0.75
CCDC78-213ENST00000482878 SPAARA0A1B0GVQ0 90 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 RAB29O14966 203 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 SLC35B1P78383 322 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 TGFBR3Q03167 851 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 PLP2Q04941 152 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 FOXL1Q12952 345 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 ACSF3Q4G176 576 aaPredicted RBP10.38□□□□□ -0.75
CCDC78-213ENST00000482878 Q56UQ5 140 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 HES3Q5TGS1 186 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 NIT1Q86X76 327 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 SMIM12Q96EX1 92 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 OR2H2O95918 312 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 COX5AP20674 150 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 NPPCP23582 126 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 CTRLP40313 264 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 WDR86Q86TI4 376 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 DRAM1Q8N682 238 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 LIN7CQ9NUP9 197 aaKnown RBP10.38□□□□□ -0.75
CCDC78-213ENST00000482878 B4GALT7Q9UBV7 327 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 SH3BGRL2Q9UJC5 107 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 ZGRF1Q86YA3 2104 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 LRP5LA4QPB2 252 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 RBFOX2O43251 390 aaKnown RBP eCLIP10.38□□□□□ -0.75
CCDC78-213ENST00000482878 C3orf79P0CE67 100 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 GNB1P62873 340 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 AMMECR1LQ6DCA0 310 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 ZNF497Q6ZNH5 498 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 UHRF2Q96PU4 802 aa10.38□□□□□ -0.75
CCDC78-213ENST00000482878 TLN1Q9Y490 2541 aaKnown RBP10.38□□□□□ -0.75
CCDC78-213ENST00000482878 KRTCAP3Q53RY4 240 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 C16orf54Q6UWD8 224 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 FAM173AQ9BQD7 235 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 PKIBQ9C010 78 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 TNRC6AQ8NDV7 1962 aaKnown RBP10.37□□□□□ -0.75
CCDC78-213ENST00000482878 ZNF891A8MT65 544 aaPredicted RBP10.37□□□□□ -0.75
CCDC78-213ENST00000482878 M0R296 226 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 RAMP3O60896 148 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 MT-CO3P00414 261 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 FRMD6-AS1P0C7T7 363 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 DEFB124Q8NES8 71 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 TNRC6BQ9UPQ9 1833 aaKnown RBP10.37□□□□□ -0.75
CCDC78-213ENST00000482878 IGHV1-69-2A0A0G2JMI3 117 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 OR2T8A6NH00 312 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 J3QT63 122 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 RBMXL2O75526 392 aaKnown RBP10.37□□□□□ -0.75
CCDC78-213ENST00000482878 YPEL3P61236 119 aaPredicted RBP10.37□□□□□ -0.75
CCDC78-213ENST00000482878 FAM53AQ6NSI3 398 aaPredicted RBP10.37□□□□□ -0.75
CCDC78-213ENST00000482878 TMEM14EPQ6UXP3 125 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 SVIPQ8NHG7 77 aa10.37□□□□□ -0.75
CCDC78-213ENST00000482878 A0A1W2PPV4 95 aa10.36□□□□□ -0.75
CCDC78-213ENST00000482878 CDC34P49427 236 aaPredicted RBP10.36□□□□□ -0.75
CCDC78-213ENST00000482878 SRSF6Q13247 344 aaKnown RBP10.36□□□□□ -0.75
CCDC78-213ENST00000482878 TTTY12Q9BZ98 90 aa10.36□□□□□ -0.75
CCDC78-213ENST00000482878 CHD8Q9HCK8 2581 aa10.36□□□□□ -0.75
CCDC78-213ENST00000482878 DMXL1Q9Y485 3027 aa10.36□□□□□ -0.75
CCDC78-213ENST00000482878 TCL1AP56279 114 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 MOB1BQ7L9L4 216 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 CXorf67Q86X51 503 aaPredicted RBP10.35□□□□□ -0.75
CCDC78-213ENST00000482878 OR8I2Q8N0Y5 310 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 SCCPDHQ8NBX0 429 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 PRO3102Q9H379 93 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 FZR1Q9UM11 496 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 MRPS16Q9Y3D3 137 aaKnown RBP10.35□□□□□ -0.75
CCDC78-213ENST00000482878 CACNA1BQ00975 2339 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 GOSR1O95249 250 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 MPV17L2Q567V2 206 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 RCHY1Q96PM5 261 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 TP73-AS1Q9UF72 201 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 MLNRO43193 412 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 G6PCP35575 357 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 CEBPDP49716 269 aaPredicted RBP10.35□□□□□ -0.75
CCDC78-213ENST00000482878 MDP1Q86V88 176 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 Q8N976 141 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 ZNF439Q8NDP4 499 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 OR52L2PQ8NGH6 319 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 PLPPR2Q96GM1 343 aa10.35□□□□□ -0.75
CCDC78-213ENST00000482878 MBNL3Q9NUK0 354 aaKnown RBP10.35□□□□□ -0.75
CCDC78-213ENST00000482878 WNK2Q9Y3S1 2297 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 CDIPTO14735 213 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 PDE6DO43924 150 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 MMP23AO75900 390 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 SRIP30626 198 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 ERVK11-1P61568 191 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 RPL30P62888 115 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms