RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 RAB29O14966 203 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 TNFSF12O43508 249 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 BUB3O43684 328 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 NXPH2O95156 264 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 CLDN1O95832 211 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 MT-CO2P00403 227 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 TRGC2P03986 189 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 CXCL1P09341 107 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 PATE4P0C8F1 98 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 IGHV4-30-4P0DP06 118 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 IAPPP10997 89 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 FABP4P15090 132 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 DDTP30046 118 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 GALR1P47211 349 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 ASCL1P50553 236 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 IDH3GP51553 393 aaPredicted RBP3.54□□□□□ -1.84
GPNMB-210ENST00000478451 LCN2P80188 198 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 TGFBR3Q03167 851 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 TNFRSF9Q07011 255 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 UBE2V1Q13404 147 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 HERPUD1Q15011 391 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 TGIF1Q15583 401 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 SSX2Q16385 188 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 PYY3Q5JQD4 70 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF343Q6P1L6 599 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 LCN15Q6UWW0 184 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 TMEM14EPQ6UXP3 125 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 SSX9Q7RTT3 188 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 OR2M7Q8NG81 312 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 OR10P1Q8NGE3 313 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 OR1P1Q8NH06 330 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 FGFBP3Q8TAT2 258 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 RNASEH2CQ8TDP1 164 aaKnown RBP3.54□□□□□ -1.84
GPNMB-210ENST00000478451 CA5BP1Q8WTZ4 195 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 ABHD3Q8WU67 409 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 GALMQ96C23 342 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 POM121L2Q96KW2 1035 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 PACRGQ96M98 296 aaPredicted RBP3.54□□□□□ -1.84
GPNMB-210ENST00000478451 IMMP2LQ96T52 175 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 HSD17B10Q99714 261 aaKnown RBP3.54□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF665Q9H7R5 613 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 RPRMQ9NS64 109 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 C1RLQ9NZP8 487 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 GAB2Q9UQC2 676 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 WIPI2Q9Y4P8 454 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 URGCP-MRPS24S4R325 110 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 HCFC1P51610 2035 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 PTPRBP23467 1997 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 ARID1AO14497 2285 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 A0A0C4DFX4 3053 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 SAA2-SAA4A0A096LPE2 208 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 TRAV24A0A0B4J272 114 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 IGKV1-6A0A0C4DH72 117 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 A0A0G2JMM0 328 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 A0A1W2PPB8 328 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 A0A1W2PRS3 328 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 MED19A0JLT2 244 aaPredicted RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 KIR3DP1A8MWS1 328 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 MKRN2OSH3BPM6 223 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 SIRPB1O00241 398 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 SLC33A1O00400 549 aaPredicted RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 WDR1O75083 606 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 CLDN14O95500 239 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 TMEM50AO95807 157 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 NGFP01138 241 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 TYMSP04818 313 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF883P0CG24 379 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 PGA5P0DJD9 388 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 CCL4P13236 92 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 ACP1P24666 158 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 IL2RGP31785 369 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 CEACAM6P40199 344 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 KIR2DS2P43631 304 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 CDC34P49427 236 aaPredicted RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 LHX2P50458 406 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 CLDN18P56856 261 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 SEC61BP60468 96 aaKnown RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 UBE2NP61088 152 aaKnown RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 PPP1CBP62140 327 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 SRYQ05066 204 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 RBPJQ06330 500 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 JOSD1Q15040 202 aaPredicted RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF146Q15072 292 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 IQCJQ1A5X6 159 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 TMEM249Q2WGJ8 235 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 COX19Q49B96 90 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 COA6Q5JTJ3 125 aaKnown RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 SPANXN5Q5MJ07 72 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 FFAR4Q5NUL3 377 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 WDR25Q64LD2 544 aaPredicted RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 SLC35E4Q6ICL7 350 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 OR8G2PQ6IF36 304 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 Q6P435 159 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF600Q6ZNG1 722 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 H2BFWTQ7Z2G1 175 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 MRPL52Q86TS9 123 aaKnown RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF329Q86UD4 541 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 TUSC5Q8IXB3 177 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 ODF3L1Q8IXM7 274 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms