RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 COMMD3Q9UBI1 195 aa11.85□□□□□ -0.51
CLIC3-201ENST00000473911 SMIM31A0A1B0GVY4 71 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 C3orf84H3BNL1 204 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
CLIC3-201ENST00000473911 S1PR2O95136 353 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 NDUFB8O95169 186 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 EIF4EP06730 217 aaKnown RBP11.84□□□□□ -0.51
CLIC3-201ENST00000473911 CRYGCP07315 174 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 RPA2P15927 270 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 HIST1H1BP16401 226 aaKnown RBP11.84□□□□□ -0.51
CLIC3-201ENST00000473911 GNRHRP30968 328 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 ERVK-16P61578 105 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 VBP1P61758 197 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 CASC10Q5T4H9 136 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 DHRS11Q6UWP2 260 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 DYNLRB2Q8TF09 96 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 EEF1AKMT3Q96AZ1 226 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 MOB3AQ96BX8 217 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 FUNDC2Q9BWH2 189 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 COMMD5Q9GZQ3 224 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 PLEKHA2Q9HB19 425 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 ANAPC10Q9UM13 185 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 S4R3C0 116 aa11.84□□□□□ -0.51
CLIC3-201ENST00000473911 TRAV3A0A0B4J244 114 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 UPK2O00526 184 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 OR2C1O95371 312 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 HLA-AP01891 365 aaKnown RBP11.83□□□□□ -0.52
CLIC3-201ENST00000473911 RLN1P04808 185 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 CTRB1P17538 263 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 NAT1P18440 290 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 OR2B8PP59922 312 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 CTRB2Q6GPI1 263 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 CLEC19AQ6UXS0 136 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 CMTM1Q8IZ96 169 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 OR2K2Q8NGT1 345 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 OR6F1Q8NGZ6 308 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 FANCD2OSQ96PS1 177 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 TUBA4BQ9H853 241 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 TMEM140Q9NV12 185 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 COMMD9Q9P000 198 aa11.83□□□□□ -0.52
CLIC3-201ENST00000473911 IZUMO1RA6ND01 250 aa11.82□□□□□ -0.52
CLIC3-201ENST00000473911 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
CLIC3-201ENST00000473911 APOA1P02647 267 aa11.82□□□□□ -0.52
CLIC3-201ENST00000473911 HLA-DMAP28067 261 aa11.82□□□□□ -0.52
CLIC3-201ENST00000473911 HRH1P35367 487 aa11.82□□□□□ -0.52
CLIC3-201ENST00000473911 ARL3P36405 182 aa11.82□□□□□ -0.52
CLIC3-201ENST00000473911 POU2AF1Q16633 256 aa11.82□□□□□ -0.52
CLIC3-201ENST00000473911 SNX29P2Q8IUI4 249 aa11.82□□□□□ -0.52
CLIC3-201ENST00000473911 C19orf73Q9NVV2 129 aa11.82□□□□□ -0.52
CLIC3-201ENST00000473911 TNCP24821 2201 aa11.82□□□□□ -0.52
CLIC3-201ENST00000473911 CGB1A6NKQ9 187 aa11.81□□□□□ -0.52
CLIC3-201ENST00000473911 A8MZ25 164 aa11.81□□□□□ -0.52
CLIC3-201ENST00000473911 F2RP25116 425 aa11.81□□□□□ -0.52
CLIC3-201ENST00000473911 TSPAN5P62079 268 aa11.81□□□□□ -0.52
CLIC3-201ENST00000473911 CD300EQ496F6 205 aaPredicted RBP11.81□□□□□ -0.52
CLIC3-201ENST00000473911 MUC7Q8TAX7 377 aa11.81□□□□□ -0.52
CLIC3-201ENST00000473911 CXorf58Q96LI9 332 aa11.81□□□□□ -0.52
CLIC3-201ENST00000473911 CCDC140Q96MF4 163 aa11.81□□□□□ -0.52
CLIC3-201ENST00000473911 SRSF8Q9BRL6 282 aaKnown RBP11.81□□□□□ -0.52
CLIC3-201ENST00000473911 QTRT1Q9BXR0 403 aaKnown RBP11.81□□□□□ -0.52
CLIC3-201ENST00000473911 FXYD6Q9H0Q3 95 aa11.81□□□□□ -0.52
CLIC3-201ENST00000473911 IGLV11-55A0A075B6I3 123 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 TRBV7-1A0A0A6YYK4 115 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 IGLC7A0M8Q6 106 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 ZNF320A2RRD8 509 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 C2orf70A6NJV1 201 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 MARCH11A6NNE9 402 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 GPR31O00270 319 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 CYB5BO43169 146 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 FOLR2P14207 255 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 S100GP29377 79 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 LPAR6P43657 344 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 RORCP51449 518 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 FAM106AQ4KMX7 169 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 LYSMD2Q8IV50 215 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 GPX8Q8TED1 209 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 DGCR14Q96DF8 476 aaKnown RBP11.8□□□□□ -0.52
CLIC3-201ENST00000473911 CMTM3Q96MX0 182 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 TM2D3Q9BRN9 247 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 HINT2Q9BX68 163 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 SCPEP1Q9HB40 452 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 THYN1Q9P016 225 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 DMRT1Q9Y5R6 373 aa11.8□□□□□ -0.52
CLIC3-201ENST00000473911 PLECQ15149 4684 aaKnown RBP11.79□□□□□ -0.52
CLIC3-201ENST00000473911 MFSD2BA6NFX1 497 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 FAM25AB3EWG3 89 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 FAM25CB3EWG5 89 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 FAM25GB3EWG6 89 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 LGALS9O00182 355 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 HPGDSO60760 199 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 SNAPC5O75971 98 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 KRASP01116 189 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 FGF2P09038 288 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 TRAPPC2P0DI81 140 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 TRAPPC2BP0DI82 140 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 RCVRNP35243 200 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 MECP2P51608 486 aaKnown RBP11.79□□□□□ -0.52
CLIC3-201ENST00000473911 CD81P60033 236 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 GUCA2BQ16661 112 aa11.79□□□□□ -0.52
CLIC3-201ENST00000473911 KLK9Q2XQG4 91 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms