RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PRSS8Q16651 343 aa10.23□□□□□ -0.77
TPM3-216ENST00000473036 ZNF585BQ52M93 769 aa10.23□□□□□ -0.77
TPM3-216ENST00000473036 SPAG16Q8N0X2 631 aa10.23□□□□□ -0.77
TPM3-216ENST00000473036 PUSL1Q8N0Z8 303 aaKnown RBP10.23□□□□□ -0.77
TPM3-216ENST00000473036 TEX45Q8NA69 505 aa10.23□□□□□ -0.77
TPM3-216ENST00000473036 OR51H1Q8NH63 302 aa10.23□□□□□ -0.77
TPM3-216ENST00000473036 OR4S2Q8NH73 311 aa10.23□□□□□ -0.77
TPM3-216ENST00000473036 MYOZ3Q8TDC0 251 aa10.23□□□□□ -0.77
TPM3-216ENST00000473036 IL22RA2Q969J5 263 aa10.23□□□□□ -0.77
TPM3-216ENST00000473036 PHB2Q99623 299 aa10.23□□□□□ -0.77
TPM3-216ENST00000473036 ZNF430Q9H8G1 570 aaPredicted RBP10.23□□□□□ -0.77
TPM3-216ENST00000473036 SHPKQ9UHJ6 478 aa10.23□□□□□ -0.77
TPM3-216ENST00000473036 TRAV3A0A0B4J244 114 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 DUXBA0A1W2PPF3 345 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 S1PR2O95136 353 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 SFT2D2O95562 160 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 HPRT1P00492 218 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 HLA-AP01891 365 aaKnown RBP10.22□□□□□ -0.77
TPM3-216ENST00000473036 RPL23AP62750 156 aaKnown RBP10.22□□□□□ -0.77
TPM3-216ENST00000473036 GNB1P62873 340 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 FXYD3Q14802 87 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 ECSCRQ19T08 205 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 C10orf55Q5SWW7 151 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 ETV3LQ6ZN32 361 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 LYG2Q86SG7 212 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 CADM3Q8N126 398 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 LGI3Q8N145 548 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 LFNGQ8NES3 379 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 OR4X2Q8NGF9 303 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 ZNF431Q8TF32 576 aaPredicted RBP10.22□□□□□ -0.77
TPM3-216ENST00000473036 TMEM222Q9H0R3 208 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 PLEKHA2Q9HB19 425 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 FLVCR2Q9UPI3 526 aa10.22□□□□□ -0.77
TPM3-216ENST00000473036 TSSC4Q9Y5U2 329 aaPredicted RBP10.22□□□□□ -0.77
TPM3-216ENST00000473036 C9orf170A2RU37 121 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 CGB1A6NKQ9 187 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 IGKV1-39P01597 117 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 IGKV1D-39P04432 117 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 ANXA7P20073 488 aaKnown RBP10.21□□□□□ -0.77
TPM3-216ENST00000473036 VDAC1P21796 283 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 UCP1P25874 307 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 FOXE3Q13461 319 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 BEAN1Q3B7T3 259 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 TEX38Q6PEX7 206 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 SSX9Q7RTT3 188 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 ZNF695Q8IW36 515 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 GRPEL2Q8TAA5 225 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 VSTM2AQ8TAG5 236 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 MITD1Q8WV92 249 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 ARPC1AQ92747 370 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 COMMD9Q9P000 198 aa10.21□□□□□ -0.77
TPM3-216ENST00000473036 KMT2CQ8NEZ4 4911 aaKnown RBP10.2□□□□□ -0.78
TPM3-216ENST00000473036 RBMXL2O75526 392 aaKnown RBP10.2□□□□□ -0.78
TPM3-216ENST00000473036 CDS2O95674 445 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 IFNA21P01568 189 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 OPN1MWP04001 364 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 APELAP0DMC3 54 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 OPN1MW2P0DN77 364 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 OPN1MW3P0DN78 364 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 ERVK-16P61578 105 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 SLC35B1P78383 322 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 DHRS2Q13268 280 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 PPP1R1AQ13522 171 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 POU2AF1Q16633 256 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 TATDN3Q17R31 274 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 VMA21Q3ZAQ7 101 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 AKIRIN2Q53H80 203 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 OR4A47Q6IF82 309 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 C8orf86Q6ZUL3 223 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 FAM219AQ8IW50 185 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 LRTM2Q8N967 370 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 ADAD2Q8NCV1 583 aaKnown RBP10.2□□□□□ -0.78
TPM3-216ENST00000473036 TMEM167AQ8TBQ9 72 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 R3HDM4Q96D70 268 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 RHOVQ96L33 236 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 TMEM56Q96MV1 263 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 DUX3Q96PT4 197 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 GNB4Q9HAV0 340 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 TMEM56-RWDD3S4R434 201 aa10.2□□□□□ -0.78
TPM3-216ENST00000473036 A0A1W2PN81 502 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 TEX22C9J3V5 150 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 KBTBD11O94819 623 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 OR2A4O95047 310 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 ELANEP08246 267 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 NQO2P16083 231 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 CHRNA7P36544 502 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 LPAR6P43657 344 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 RAB9AP51151 201 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 TNXAQ16473 311 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 DEFB136Q30KP8 78 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 KHDC1LQ5JSQ8 128 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 UNQ5815/PRO19632Q6UWF5 114 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 C19orf35Q6ZS72 473 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 C1QL4Q86Z23 238 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 C12orf45Q8N5I9 185 aaPredicted RBP10.19□□□□□ -0.78
TPM3-216ENST00000473036 COMMD1Q8N668 190 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 ZNF491Q8N8L2 437 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 ABHD5Q8WTS1 349 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 GLYATL2Q8WU03 294 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 RBPMSQ93062 196 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms