RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 WFDC3Q8IUB2 231 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 MFSD4AQ8N468 514 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 OR4S2Q8NH73 311 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 GPHA2Q96T91 129 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 DCSTAMPQ9H295 470 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 IGLV11-55A0A075B6I3 123 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 TRBV7-1A0A0A6YYK4 115 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 TRAV25A0A0B4J276 109 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 A0A0J9YWU9 116 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 CXorf65A6NEN9 183 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 MFSD2BA6NFX1 497 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 DEFA4P12838 97 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 HIST1H1BP16401 226 aaKnown RBP9.12□□□□□ -0.95
COL5A1-207ENST00000469093 RPL8P62917 257 aaKnown RBP9.12□□□□□ -0.95
COL5A1-207ENST00000469093 ZNF585BQ52M93 769 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 C22orf42Q6IC83 251 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 OR4A47Q6IF82 309 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 BTNL8Q6UX41 500 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 SSX9Q7RTT3 188 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 OR13F1Q8NGS4 319 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 TCTEX1D2Q8WW35 142 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 MARC2Q969Z3 335 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 TAS2R8Q9NYW2 309 aa9.12□□□□□ -0.95
COL5A1-207ENST00000469093 PLECQ15149 4684 aaKnown RBP9.11□□□□□ -0.95
COL5A1-207ENST00000469093 HRASP01112 189 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 REG1AP05451 166 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 HLA-GP17693 338 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 FGF9P31371 208 aaPredicted RBP9.11□□□□□ -0.95
COL5A1-207ENST00000469093 ALDH3B2P48448 385 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 TNFRSF9Q07011 255 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 PMS2P11Q13670 270 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 GPR107Q5VW38 600 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 CEMP1Q6PRD7 247 aaPredicted RBP9.11□□□□□ -0.95
COL5A1-207ENST00000469093 ZNF66Q6ZN08 573 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 RBPMS2Q6ZRY4 209 aaKnown RBP9.11□□□□□ -0.95
COL5A1-207ENST00000469093 Q6ZWC4 215 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 OR1L6Q8NGR2 347 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 NUDCD2Q8WVJ2 157 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 YIPF6Q96EC8 236 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 CXorf58Q96LI9 332 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 FUNDC2Q9BWH2 189 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 TXNL4BQ9NX01 149 aaKnown RBP9.11□□□□□ -0.95
COL5A1-207ENST00000469093 MRPL27Q9P0M9 148 aaKnown RBP9.11□□□□□ -0.95
COL5A1-207ENST00000469093 ANXA10Q9UJ72 324 aa9.11□□□□□ -0.95
COL5A1-207ENST00000469093 IGHV3-35A0A0C4DH35 117 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 SMIM30A4D0T7 59 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 NUPR2A6NF83 97 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 TMEM235A6NFC5 223 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 CCDC160A6NGH7 325 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 SPRY2O43597 315 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 SSX5O60225 188 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 BMI1P35226 326 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 OR2B8PP59922 312 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 LYG2Q86SG7 212 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 CLVS1Q8IUQ0 354 aaPredicted RBP9.1□□□□□ -0.95
COL5A1-207ENST00000469093 OR2C3Q8N628 320 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 OR4A5Q8NH83 315 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 ZNF502Q8TBZ5 544 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 C5orf66Q9H5L9 145 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 CCL28Q9NRJ3 127 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 BET1LQ9NYM9 111 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 TP53TG1Q9Y2A0 90 aa9.1□□□□□ -0.95
COL5A1-207ENST00000469093 TRAV3A0A0B4J244 114 aa9.09□□□□□ -0.95
COL5A1-207ENST00000469093 IGLC7A0M8Q6 106 aa9.09□□□□□ -0.95
COL5A1-207ENST00000469093 TNFSF12O43508 249 aa9.09□□□□□ -0.95
COL5A1-207ENST00000469093 PTBP1P26599 531 aaKnown RBP eCLIP9.09□□□□□ -0.95
COL5A1-207ENST00000469093 GPR183P32249 361 aa9.09□□□□□ -0.95
COL5A1-207ENST00000469093 ELLP55199 621 aaPredicted RBP9.09□□□□□ -0.95
COL5A1-207ENST00000469093 LSM3P62310 102 aaKnown RBP9.09□□□□□ -0.95
COL5A1-207ENST00000469093 PLET1Q6UQ28 207 aa9.09□□□□□ -0.95
COL5A1-207ENST00000469093 TPRA1Q86W33 373 aa9.09□□□□□ -0.95
COL5A1-207ENST00000469093 AIFM2Q9BRQ8 373 aa9.09□□□□□ -0.95
COL5A1-207ENST00000469093 HRASLSQ9HDD0 168 aa9.09□□□□□ -0.95
COL5A1-207ENST00000469093 UFC1Q9Y3C8 167 aa9.09□□□□□ -0.95
COL5A1-207ENST00000469093 NOTOA8MTQ0 251 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 UPK2O00526 184 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 UBE2CO00762 179 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 PTHLHP12272 177 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 ATF4P18848 351 aaPredicted RBP9.08□□□□□ -0.96
COL5A1-207ENST00000469093 FCGR2CP31995 323 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 APOC4P55056 127 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 GNG2P59768 71 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 DEFB135Q30KP9 77 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 SLC38A6Q8IZM9 456 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 SPAG16Q8N0X2 631 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 RAB2BQ8WUD1 216 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 RNF183Q96D59 192 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 SPAG8Q99932 426 aaPredicted RBP9.08□□□□□ -0.96
COL5A1-207ENST00000469093 BCL7BQ9BQE9 202 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 ZNF436Q9C0F3 470 aaPredicted RBP9.08□□□□□ -0.96
COL5A1-207ENST00000469093 UBQLN2Q9UHD9 624 aa9.08□□□□□ -0.96
COL5A1-207ENST00000469093 TSPAN4O14817 238 aa9.07□□□□□ -0.96
COL5A1-207ENST00000469093 RBFOX2O43251 390 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL5A1-207ENST00000469093 GABARAPO95166 117 aa9.07□□□□□ -0.96
COL5A1-207ENST00000469093 RPA2P15927 270 aa9.07□□□□□ -0.96
COL5A1-207ENST00000469093 TMBIM6P55061 237 aa9.07□□□□□ -0.96
COL5A1-207ENST00000469093 MSMO1Q15800 293 aa9.07□□□□□ -0.96
COL5A1-207ENST00000469093 POU2AF1Q16633 256 aa9.07□□□□□ -0.96
COL5A1-207ENST00000469093 CROCCP3Q8IVE0 287 aa9.07□□□□□ -0.96
COL5A1-207ENST00000469093 RPP25LQ8N5L8 163 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms