RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 NANPQ8TBE9 248 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 SEC22AQ96IW7 307 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 C18orf12Q96KH6 178 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 ZNF48Q96MX3 618 aaPredicted RBP3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 CLCC1Q96S66 551 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 PHB2Q99623 299 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 HSD17B10Q99714 261 aaKnown RBP3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 NABP2Q9BQ15 211 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 ZNF251Q9BRH9 671 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 PDCD10Q9BUL8 212 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 ALX4Q9H161 411 aaPredicted RBP3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 GSKIPQ9P0R6 139 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 GAB2Q9UQC2 676 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 PRELID3BQ9Y3B1 194 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 MED13LQ71F56 2210 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 PTPN13Q12923 2485 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 DCHS2Q6V1P9 2916 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 HECTD1Q9ULT8 2610 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 FBN2P35556 2912 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 MDFIC2A0A1B0GVS7 189 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 GAGE10A6NGK3 116 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 NCBP2LA6PVI3 153 aaKnown RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 SNRPGP15A8MWD9 76 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 ODF3BA8MYP8 253 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 H0Y980 276 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 H0YJW9 148 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 LY6LH3BQJ8 138 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 J3QLI3 93 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 TIMM23O14925 209 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 CD5LO43866 347 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 PFDN1O60925 122 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 S1PR2O95136 353 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 DUS4LO95620 317 aaKnown RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 HPRT1P00492 218 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 IGKV1D-33P01593 117 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 IGKV1-33P01594 117 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 SNRNP70P08621 437 aaKnown RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 PSG1P11464 419 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 CNTFRP26992 372 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 KIR2DS2P43631 304 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 BCAP31P51572 246 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 AKR1C2P52895 323 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 BRWD1-AS2P59051 145 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 RRAS2P62070 204 aaPredicted RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 EIF4EBP1Q13541 118 aaPredicted RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 MSMO1Q15800 293 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 RTL8BQ17RB0 113 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 IZUMO4Q1ZYL8 232 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 DEFB112Q30KQ8 113 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 ZNF585BQ52M93 769 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 KLF17Q5JT82 389 aaPredicted RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 MINOS1Q5TGZ0 78 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 GGNBP1Q5YKI7 109 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 GSG1LQ6UXU4 331 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 FAM219AQ8IW50 185 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 FOXRED2Q8IWF2 684 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 VKORC1L1Q8N0U8 176 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 CADM3Q8N126 398 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 SLC35G3Q8N808 338 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 C8orf31Q8N9H6 132 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 DMBX1Q8NFW5 382 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 LHFPL5Q8TAF8 219 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 GLYATL2Q8WU03 294 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 MITD1Q8WV92 249 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 TMEM170AQ8WVE7 144 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 ST6GALNAC6Q969X2 333 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 GPR146Q96CH1 333 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 FLYWCH2Q96CP2 140 aaKnown RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 MALSU1Q96EH3 234 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 RRNAD1Q96FB5 475 aaKnown RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 ADTRPQ96IZ2 230 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 TMEM222Q9H0R3 208 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 GHITMQ9H3K2 345 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 RANBP3Q9H6Z4 567 aaPredicted RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 NUP50Q9UKX7 468 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 NSG2Q9Y328 171 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 WASHC3Q9Y3C0 194 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 TBL2Q9Y4P3 447 aaKnown RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 MINOS1-NBL1R4GNA1 71 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 ANKRD17O75179 2603 aaKnown RBP3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 ABCA12Q86UK0 2595 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 DSCAML1Q8TD84 2053 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 CENPEQ02224 2701 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 CELSR2Q9HCU4 2923 aa3.26□□□□□ -1.89
TMEM39A-204ENST00000468545 CRYBG3Q68DQ2 2970 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 NAV2Q8IVL1 2488 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 TRAV3A0A0B4J244 114 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 A0A0B4J2A0 478 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 C7orf66A4D0T2 115 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 SRRM4A7MD48 611 aaKnown RBP3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 MPTX1A8MV57 137 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 TEX22C9J3V5 150 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 SMLR1H3BR10 107 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 CCNKO75909 580 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 ATG12O94817 140 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 CDS2O95674 445 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 TOMM40O96008 361 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 IGKV1-39P01597 117 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 IGKV1-5P01602 117 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OPN1MWP04001 364 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms