RNA–Protein interactions for RNA: ENST00000468516.1

FOXN4-204, Transcript of forkhead box N4, humanhuman

TSL 2

Gene FOXN4, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-204ENST00000468516 IGKV1-16P04430 117 aa10.61□□□□□ -0.71
FOXN4-204ENST00000468516 SNRNP70P08621 437 aaKnown RBP10.61□□□□□ -0.71
FOXN4-204ENST00000468516 IGHV1-8P0DP01 117 aa10.61□□□□□ -0.71
FOXN4-204ENST00000468516 RNF212Q495C1 297 aa10.61□□□□□ -0.71
FOXN4-204ENST00000468516 FAM122CQ6P4D5 195 aa10.61□□□□□ -0.71
FOXN4-204ENST00000468516 ZNF841Q6ZN19 808 aa10.61□□□□□ -0.71
FOXN4-204ENST00000468516 C11orf42Q8N5U0 333 aa10.61□□□□□ -0.71
FOXN4-204ENST00000468516 ENY2Q9NPA8 101 aa10.61□□□□□ -0.71
FOXN4-204ENST00000468516 SRRM4A7MD48 611 aaKnown RBP10.6□□□□□ -0.71
FOXN4-204ENST00000468516 B4DEV8 164 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 SAA1P0DJI8 122 aaPredicted RBP10.6□□□□□ -0.71
FOXN4-204ENST00000468516 CDSNQ15517 529 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 AVPI1Q5T686 147 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 TVP23CQ96ET8 276 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 NEIL1Q96FI4 390 aaPredicted RBP10.6□□□□□ -0.71
FOXN4-204ENST00000468516 NPVFQ9HCQ7 196 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 ZNRD1Q9P1U0 126 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 YLPM1P49750 1951 aaKnown RBP10.6□□□□□ -0.71
FOXN4-204ENST00000468516 DOCK11Q5JSL3 2073 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 ZFP92A6NM28 416 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 MT-ND4LP03901 98 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 USF1P22415 310 aaPredicted RBP10.6□□□□□ -0.71
FOXN4-204ENST00000468516 IL3RAP26951 378 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 RAB13P51153 203 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 FGF8P55075 233 aaPredicted RBP10.6□□□□□ -0.71
FOXN4-204ENST00000468516 PNRC1Q12796 327 aaPredicted RBP10.6□□□□□ -0.71
FOXN4-204ENST00000468516 C2orf83Q53S99 150 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 C11orf71Q6IPW1 123 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 ABHD12Q8N2K0 398 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 OR4C13Q8NGP0 309 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 OR1L8Q8NGR8 309 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 OR10X1Q8NGY0 326 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 VSTM2AQ8TAG5 236 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 TMEM167AQ8TBQ9 72 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 RAB24Q969Q5 203 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 HIST1H2BAQ96A08 127 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 HARBI1Q96MB7 349 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 YPEL4Q96NS1 127 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 MGST2Q99735 147 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 NIPSNAP3BQ9BS92 247 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 GGTLC1Q9BX51 225 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 TMEM133Q9H2Q1 129 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 SLC25A22Q9H936 323 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 PLEKHA3Q9HB20 300 aa10.6□□□□□ -0.71
FOXN4-204ENST00000468516 RALYQ9UKM9 306 aaKnown RBP10.6□□□□□ -0.71
FOXN4-204ENST00000468516 TEX50A0A1B0GTY4 177 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 A0A1W2PPH5 198 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 CA2P00918 260 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 C1QTNF9P0C862 333 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 CTRB1P17538 263 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 MC5RP33032 325 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 CDC34P49427 236 aaPredicted RBP10.59□□□□□ -0.71
FOXN4-204ENST00000468516 PSMB3P49720 205 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 ERVFRD-1P60508 538 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 RPS16P62249 146 aaKnown RBP10.59□□□□□ -0.71
FOXN4-204ENST00000468516 CTRB2Q6GPI1 263 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 C1orf159Q96HA4 380 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 SIRT7Q9NRC8 400 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 CBLN4Q9NTU7 201 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 WASHC3Q9Y3C0 194 aa10.59□□□□□ -0.71
FOXN4-204ENST00000468516 PUS1Q9Y606 427 aaKnown RBP eCLIP10.59□□□□□ -0.71
FOXN4-204ENST00000468516 SMCO3A2RU48 225 aa10.58□□□□□ -0.72
FOXN4-204ENST00000468516 IFNA4P05014 189 aa10.58□□□□□ -0.72
FOXN4-204ENST00000468516 FBP1P09467 338 aa10.58□□□□□ -0.72
FOXN4-204ENST00000468516 COL8A2P25067 703 aa10.58□□□□□ -0.72
FOXN4-204ENST00000468516 MEF2BQ02080 365 aaPredicted RBP10.58□□□□□ -0.72
FOXN4-204ENST00000468516 ARSJQ5FYB0 599 aaPredicted RBP10.58□□□□□ -0.72
FOXN4-204ENST00000468516 FLYWCH2Q96CP2 140 aaKnown RBP10.58□□□□□ -0.72
FOXN4-204ENST00000468516 MALSU1Q96EH3 234 aa10.58□□□□□ -0.72
FOXN4-204ENST00000468516 NDUFA4L2Q9NRX3 87 aa10.58□□□□□ -0.72
FOXN4-204ENST00000468516 POLEQ07864 2286 aa10.58□□□□□ -0.72
FOXN4-204ENST00000468516 ICE1Q9Y2F5 2266 aa10.58□□□□□ -0.72
FOXN4-204ENST00000468516 CXorf65A6NEN9 183 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 YIF1AO95070 293 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 IGLV1-47P01700 117 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 IGLV2-23P01705 113 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 CRYBA1P05813 215 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 RPL29P47914 159 aaKnown RBP10.57□□□□□ -0.72
FOXN4-204ENST00000468516 CD81P60033 236 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 TEPPQ6URK8 271 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 UNQ6494/PRO21346Q6UXR6 183 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 TGIF2LXQ8IUE1 241 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 LY6G5BQ8NDX9 201 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 BEND2Q8NDZ0 799 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 C20orf24Q9BUV8 137 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 RAB1BQ9H0U4 201 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 MIOXQ9UGB7 285 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 MLXQ9UH92 298 aa10.57□□□□□ -0.72
FOXN4-204ENST00000468516 A0A1W2PN81 502 aa10.56□□□□□ -0.72
FOXN4-204ENST00000468516 RNASE2P10153 161 aaKnown RBP10.56□□□□□ -0.72
FOXN4-204ENST00000468516 CHRNA7P36544 502 aa10.56□□□□□ -0.72
FOXN4-204ENST00000468516 AKR1C3P42330 323 aa10.56□□□□□ -0.72
FOXN4-204ENST00000468516 RPL8P62917 257 aaKnown RBP10.56□□□□□ -0.72
FOXN4-204ENST00000468516 WDR25Q64LD2 544 aaPredicted RBP10.56□□□□□ -0.72
FOXN4-204ENST00000468516 DTX2Q86UW9 622 aa10.56□□□□□ -0.72
FOXN4-204ENST00000468516 NEU4Q8WWR8 484 aaPredicted RBP10.56□□□□□ -0.72
FOXN4-204ENST00000468516 SDF2L1Q9HCN8 221 aa10.56□□□□□ -0.72
FOXN4-204ENST00000468516 TMEM242Q9NWH2 141 aa10.56□□□□□ -0.72
FOXN4-204ENST00000468516 PXMP4Q9Y6I8 212 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms